Factsheet for VIT_16s0098g01630.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047662	Potato	cytosol	84.53	92.19
PGSC0003DMT400050414	Potato	cytosol	84.0	91.94
Solyc06g052030.2.1	Tomato	plastid	74.63	90.55
CDY14379	Canola	cytosol	80.95	88.59
Bra003054.1-P	Field mustard	cytosol	80.84	88.48
CDY35657	Canola	cytosol	80.84	88.48
GSMUA_Achr1P28070_001	Banana	cytosol	77.26	87.38
AT5G53480.1	Thale cress	cytosol	79.79	87.13
GSMUA_Achr3P25220_001	Banana	cytosol	73.37	87.02
Solyc03g082940.2.1	Tomato	plastid	87.05	86.69
KRH53541	Soybean	cytosol	78.95	86.11
Os12t0568800-01	Rice	plasma membrane	63.16	85.35
EES16185	Sorghum	cytosol	77.26	84.17
TraesCS5A01G077200.1	Wheat	golgi	77.16	84.06
HORVU5Hr1G021580.1	Barley	cytosol	77.05	83.94
TraesCS5D01G095100.1	Wheat	golgi	77.05	83.94
TraesCS5D01G094600.1	Wheat	cytosol	77.05	83.94
TraesCS5B01G088700.1	Wheat	cytosol	77.05	83.94
TraesCS5A01G082600.1	Wheat	golgi	77.05	83.94
KRH64395	Soybean	peroxisome	68.53	83.78
TraesCS5B01G088400.1	Wheat	cytosol	76.63	83.49
HORVU5Hr1G021530.2	Barley	cytosol	76.53	82.71
GSMUA_Achr5P09570_001	Banana	cytosol	20.32	79.75
VIT_10s0092g00320.t01	Wine grape	cytosol	3.26	75.61
Zm00001d041556_P002	Maize	cytosol	77.47	74.57
GSMUA_Achr5P09580_001	Banana	cytosol	26.53	67.38
Zm00001d030694_P002	Maize	mitochondrion	75.89	67.13
VIT_08s0058g00270.t01	Wine grape	cytosol	58.21	63.42
VIT_18s0001g00910.t01	Wine grape	cytosol	19.05	20.41
VIT_03s0038g02830.t01	Wine grape	cytosol	17.68	18.75

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100265913	wikigene:100265913	MapMan:23.5.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:CBI23029	ProteinID:CBI23029.3	ncoils:Coil	UniProt:E0CV68	EMBL:FN595247	GO:GO:0000060
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005635	GO:GO:0005737	GO:GO:0006606	GO:GO:0006607
GO:GO:0006610	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913	GO:GO:0008139	GO:GO:0008150
GO:GO:0008536	GO:GO:0008565	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0031965
GO:GO:0034399	InterPro:IPR001494	InterPro:IPR011989	InterPro:Importin-beta_N	InterPro:KPNB1_plant	EntrezGene:LOC100265913
wikigene:LOC100265913	PFAM:PF03810	PFAM:PF13513	PFscan:PS50166	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44
SMART:SM00913	SUPFAM:SSF48371	TIGR:TC63998	UniParc:UPI0001BE1FB7	ArrayExpress:VIT_16s0098g01630	EnsemblPlantsGene:VIT_16s0098g01630
EnsemblPlants:VIT_16s0098g01630.t01	unigene:Vvi.5759	RefSeq:XP_002276600	RefSeq:XP_002276600.1	SEG:seg	:

Description

No Description!

Coordinates

chr16:+:21758099..21763917

Molecular Weight (calculated)

105699.0 Da

IEP (calculated)

4.641

GRAVY (calculated)

-0.055

Length

950 amino acids

Sequence
(BLAST)

001: MRTHNFHTSH TLTQQTHNCS RPTVWRFLHR QPQLPESSST FASSSLFLSL HFLSPRVSQR RFALFTIRDC SIAVVPRYNM AMEVTQVLLN AQSVDGNIRK
101: HAEESLKQFQ DQNLPSFLLS LSGELANDEK PVDSRKLAGL ILKNALDAKE QHRKFELVQR WLSLDAAVKT QIKTCLLQTL SSPVPDARST ASQVIAKIAG
201: IELPQKQWPE LIGSLLSNIH QLPAHVKQAT LETLGYLCEE VSPDVVDQDQ VNKILTAVVQ GMNSSEGNND VRLAATRALY NALGFAQANF TNDMERDYIM
301: RVVCEATLSP EVKIRQAAFE CLVSISSTYY EKLAPYIQDI FNITAKAVRE DEEPVALQAI EFWSSICDEE IDILEEYGGD FSGDSDIPCF YFIKQALPAL
401: VPMLLETLLK QEEDQDQDEG AWNLAMAGGT CLGLVARTVG DDIVPLVMPF IEENITKPDW RQREAATYAF GSILEGPSPD KLAPIVNVAL NFMLSALTKD
501: PNNHVKDTTA WTLGRIFEFL HGSTMETPII THANCQQIIT VLLLSMKDVP NVAEKACGAL YFLAQGYEDV GSASPLTPFF QEIVQSLLTV THRKDAGESR
601: LRTSAYETLN EVVRCSTDET APMVLQLVPV IMMELHQTLE AQKLSSDERE KQNELQGLLC GCLQVIIQKL GSSEPTKYVF MQYADQIMGL FLRVFACRSA
701: TVHEEAMLAI GALAYATGPD FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDICRALE DKILPYCDGI MTLLLKDLSS NQLHRSVKPP IFSCFGDIAL
801: AIGENFEKYL MYAMPMLQSA AELSSHTAGA DDEMTEYTNL LRNGILEAYS GIFQGFKNSP KTQLLIPYAP HILQFLDSIY MEKDMDDVVM KTAIGVLGDL
901: ADTLGSNAGS LIQQSLSSKD FLNECLSSED HLIKESAEWA KLAISRAISV

Best Arabidopsis Sequence Match ( AT5G53480.1 )
(BLAST)

001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV

Arabidopsis Description

KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.