Factsheet for Zm00001d030694_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16185	Sorghum	cytosol	78.77	97.02
Os12t0568800-01	Rice	plasma membrane	60.8	92.89
HORVU5Hr1G021580.1	Barley	cytosol	75.23	92.66
TraesCS5A01G082600.1	Wheat	golgi	75.23	92.66
TraesCS5B01G088700.1	Wheat	cytosol	75.14	92.55
TraesCS5D01G095100.1	Wheat	golgi	75.05	92.43
TraesCS5A01G077200.1	Wheat	golgi	74.67	91.97
TraesCS5D01G094600.1	Wheat	cytosol	74.58	91.86
TraesCS5B01G088400.1	Wheat	cytosol	74.21	91.4
HORVU5Hr1G021530.2	Barley	cytosol	74.21	90.67
Zm00001d041556_P002	Maize	cytosol	78.03	84.9
GSMUA_Achr3P25220_001	Banana	cytosol	62.57	83.9
GSMUA_Achr1P28070_001	Banana	cytosol	65.55	83.81
PGSC0003DMT400047662	Potato	cytosol	66.11	81.52
PGSC0003DMT400050414	Potato	cytosol	65.55	81.11
Solyc06g052030.2.1	Tomato	plastid	58.57	80.33
KRH41369	Soybean	cytosol, endoplasmic reticulum, nucleus	64.62	79.77
KRH60084	Soybean	cytosol, endoplasmic reticulum, nucleus	64.34	79.43
CDY35657	Canola	cytosol	63.87	79.03
CDY14379	Canola	cytosol	63.69	78.8
Bra003054.1-P	Field mustard	cytosol	63.59	78.69
GSMUA_Achr5P09570_001	Banana	cytosol	17.69	78.51
AT5G53480.1	Thale cress	cytosol	63.5	78.39
KRH64395	Soybean	peroxisome	56.33	77.86
KRH53541	Soybean	cytosol	62.38	76.92
VIT_16s0098g01630.t01	Wine grape	plastid	67.13	75.89
Solyc03g082940.2.1	Tomato	plastid	66.01	74.32
GSMUA_Achr5P09580_001	Banana	cytosol	24.3	69.79
Zm00001d038021_P001	Maize	plastid	49.72	60.75
Zm00001d010512_P001	Maize	plastid	48.42	59.36
Zm00001d026696_P005	Maize	cytosol	15.55	18.76
Zm00001d002936_P010	Maize	cytosol	15.55	18.74

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.60.110.10	MapMan:23.5.1.2.1	UniProt:A0A1D6KE00	InterPro:ARM-like	InterPro:ARM-type_fold
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913	GO:GO:0008150
GO:GO:0008536	GO:GO:0008565	InterPro:IPR001494	InterPro:IPR001938	InterPro:IPR011989	InterPro:IPR037176
InterPro:Importin-beta_N	InterPro:KPNB1_plant	ProteinID:ONM01402.1	InterPro:Osmotin/thaumatin-like_sf	PFAM:PF00314	PFAM:PF03810
PFAM:PF13513	PFscan:PS50166	PFscan:PS51367	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00205
SMART:SM00913	SUPFAM:SSF48371	SUPFAM:SSF49870	InterPro:Thaumatin	UniParc:UPI0008447A52	EnsemblPlantsGene:Zm00001d030694
EnsemblPlants:Zm00001d030694_P002	EnsemblPlants:Zm00001d030694_T002	SEG:seg	:	:	:

Description

Thaumatin-like protein

Coordinates

chr1:+:153742904..153749365

Molecular Weight (calculated)

116518.0 Da

IEP (calculated)

4.407

GRAVY (calculated)

0.045

Length

1074 amino acids

Sequence
(BLAST)

0001: MSLDVTQVLL SAQSADGAVR KHAEESLKQF QEQNLPGFLL SLSSELANEE KPEESRRLAG LILKNALDAK EQHRKNELFQ RWLALDAGAK AQIKGLLLQT
0101: LTSPVASARS TASQVIAKVA GIEIPQKQWP ELIGSLLANI HQVQPNVKQA TLETLGYLCE EVSPDAVDQD QVNKILTAVV QGMNASEANS DVRLAATRAL
0201: YNALGFAQVN FSNDMERDYI MRVVCEATQS PDVKIRQAAF ECLVAISSTY YDKLATYMRD IFNITAKAVR GDEESVALQA IEFWSSICDE EIDILDEYSS
0301: EFTADSDVPC YYFIKQALPA LVPMLLETLL KQEEDQDLDE GAWNLAMAGG TCLGLVARTV GDDIVPLVMP FVEENITKSE WRQREAATYA FGSILEGPSA
0401: DKLAPLVNVA LGFMLSALMK DPSNHVKDTT AWTLGRIFEF LHGSALETPP IITAENCQQI LTVLLHSMKD VPNVAEKACG ALYFLAQGYV DSGSASPLSP
0501: FFQDIVQNLL MVTHREDAGE SRLRTAAYET LNEVVRCSTE ETAAIVMQLV PVIMVELHQT LEAEKLSTDE REKRSELQGL LCGCLQVIIQ KLGGMESTKY
0601: SFLQYADQMM ELFLRVFACR NATVHEEAML AIGALAYAAG PNFAKYMAQF YQYLEMGLQN FEEYQVCAIT VGVVGDLCRA LEDKILPFCD GIMTQLLKDL
0701: SSNQLHRSVK PPIFSCFGDI ALAIGENFEK YLIYAMPMLQ SAADLSAHTT ATDDEMLDYT NQLRSGILEA YSGILQGFKS SPKTQLLMSY APHIIQFLDA
0801: LYNGKDMDDA VMKTAIGVLG DLADTLGVHA GPLINQSTST QAFLEECLAS DDPLAMAGAL VFVAVLLAAS VGATTATTLT IHNLCPHPVW PLVTPSSGFP
0901: SISTNTARLG PNALLSLSFP PTFWAGRVAA RTGCDAAASG CWTGTTPPAT VVQVTVHDGG NLDQATYSVS LVDGFNVPMV VSPQAVGGGQ CPALGCPINL
1001: NCDCPPQNRT AEGAACRGPP EYFKNRCPLT RTTPTDVEPV PQSCRAPGEL KVIFCQATIV TCGGEAERTV LADS

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.