Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr1P28070_001 | Banana | cytosol | 90.01 | 85.83 |
HORVU5Hr1G021580.1 | Barley | cytosol | 86.02 | 79.01 |
TraesCS5A01G082600.1 | Wheat | golgi | 86.02 | 79.01 |
TraesCS5B01G088700.1 | Wheat | cytosol | 86.02 | 79.01 |
Os12t0568800-01 | Rice | plasma membrane | 69.29 | 78.95 |
TraesCS5D01G095100.1 | Wheat | golgi | 85.89 | 78.9 |
TraesCS5A01G077200.1 | Wheat | golgi | 85.64 | 78.67 |
PGSC0003DMT400047662 | Potato | cytosol | 85.52 | 78.65 |
TraesCS5D01G094600.1 | Wheat | cytosol | 85.52 | 78.56 |
TraesCS5B01G088400.1 | Wheat | cytosol | 85.52 | 78.56 |
PGSC0003DMT400050414 | Potato | cytosol | 84.89 | 78.34 |
EES16185 | Sorghum | cytosol | 85.27 | 78.33 |
HORVU5Hr1G021530.2 | Barley | cytosol | 85.64 | 78.04 |
KRH41369 | Soybean | cytosol, endoplasmic reticulum, nucleus | 83.4 | 76.78 |
Solyc06g052030.2.1 | Tomato | plastid | 74.78 | 76.5 |
KRH60084 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.77 | 76.21 |
CDY35657 | Canola | cytosol | 81.65 | 75.35 |
CDY14379 | Canola | cytosol | 81.52 | 75.23 |
Bra003054.1-P | Field mustard | cytosol | 81.4 | 75.12 |
AT5G53480.1 | Thale cress | cytosol | 81.15 | 74.71 |
VIT_16s0098g01630.t01 | Wine grape | plastid | 87.02 | 73.37 |
KRH53541 | Soybean | cytosol | 79.15 | 72.79 |
Solyc03g082940.2.1 | Tomato | plastid | 85.52 | 71.8 |
KRH64395 | Soybean | peroxisome | 69.54 | 71.69 |
GSMUA_Achr5P09580_001 | Banana | cytosol | 32.46 | 69.52 |
Zm00001d041556_P002 | Maize | cytosol | 84.52 | 68.59 |
GSMUA_Achr5P09570_001 | Banana | cytosol | 20.22 | 66.94 |
Zm00001d030694_P002 | Maize | mitochondrion | 83.9 | 62.57 |
GSMUA_Achr8P01910_001 | Banana | cytosol | 62.67 | 62.52 |
GSMUA_Achr5P28110_001 | Banana | cytosol | 61.55 | 58.62 |
GSMUA_Achr10P... | Banana | cytosol | 61.55 | 58.62 |
GSMUA_Achr4P16360_001 | Banana | cytosol | 11.86 | 18.03 |
GSMUA_Achr8P34170_001 | Banana | cytosol | 19.23 | 17.28 |
GSMUA_Achr4P16350_001 | Banana | cytosol | 5.74 | 14.84 |
Protein Annotations
Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 |
EnsemblPlantsGene:GSMUA_Achr3G25220_001 | EnsemblPlants:GSMUA_Achr3P25220_001 | EnsemblPlants:GSMUA_Achr3T25220_001 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
InterPro:KPNB1_plant | UniProt:M0SHN8 | PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 |
PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI000294F1EC | SEG:seg | : |
Description
Putative Importin subunit beta-1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G25220_001]
Coordinates
chr3:+:25482421..25485815
Molecular Weight (calculated)
88212.2 Da
IEP (calculated)
4.554
GRAVY (calculated)
0.025
Length
801 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEVTQILL NAQSVDGSIR KHAEESLKQF QEQNLSAFLL SLSNELVSNE KPVDSRKLAG LVLKNALDAK EQHRKSELAQ RWLSLDIAVK AQVKACLLQT
101: LASPVPDARS TASQVIAKIA GIELPQKLWP ELIGSLLSNI HQLQPHVKQA TLETLGYLCE EVSPQVVDQD QVNKILTAVV QGMNASEGSS DVRLAATRAL
201: YNALGFAQAN FSNDMERDYI MRVVCEATLS QEVKIRQSAF ECLVAISSTY YDKLASYMQD IFTITAKADE GAWNLAMAGG TCLGLVARTV GDDIVPLVMP
301: FIEENITKPD WRQREAATYA FGSILEGPSP DKLTPIVHVA LSFMLTALMN DPNNHVKDTT AWTLGRIFEF LHGSTVETPI ITPENCQQIL TVLLQSMKDV
401: PNVAEKACGA LYFLAQGYED VGAVSPLSPF YQNIIQALLT VTRREDAGES RLRTAAYETL NEIVRCSTDE TAPIVMQLVP VIMMELHQTL EAQKLSSDER
501: EKQNELQGLL CGCLQVIIQK LGAAETTKYG FMQYTDQIMD LFLRVFACRN ATVHEEAMLA IGALAYATGT NFLKYMQGFY PYLEMGLQNF EEYQVCAITV
601: GVVGDLCRAL EDKILPFCDG IMTQLLKDLS SNQLHRSVKP PIFSCFGDIA LAIGENFEKY LIYAMPMLQS AAELSAHAVA DDDDILEYTN QLRNGILEAY
701: SGILQGFKSS PKTQLLMPYA YHILQFIDTL YSEKDMDDAV MKTAIGVLGD LADTLGSHVG PLINQSVSSK GFLEECLSSD DGLIKESADW AKLAISRAVS
801: G
101: LASPVPDARS TASQVIAKIA GIELPQKLWP ELIGSLLSNI HQLQPHVKQA TLETLGYLCE EVSPQVVDQD QVNKILTAVV QGMNASEGSS DVRLAATRAL
201: YNALGFAQAN FSNDMERDYI MRVVCEATLS QEVKIRQSAF ECLVAISSTY YDKLASYMQD IFTITAKADE GAWNLAMAGG TCLGLVARTV GDDIVPLVMP
301: FIEENITKPD WRQREAATYA FGSILEGPSP DKLTPIVHVA LSFMLTALMN DPNNHVKDTT AWTLGRIFEF LHGSTVETPI ITPENCQQIL TVLLQSMKDV
401: PNVAEKACGA LYFLAQGYED VGAVSPLSPF YQNIIQALLT VTRREDAGES RLRTAAYETL NEIVRCSTDE TAPIVMQLVP VIMMELHQTL EAQKLSSDER
501: EKQNELQGLL CGCLQVIIQK LGAAETTKYG FMQYTDQIMD LFLRVFACRN ATVHEEAMLA IGALAYATGT NFLKYMQGFY PYLEMGLQNF EEYQVCAITV
601: GVVGDLCRAL EDKILPFCDG IMTQLLKDLS SNQLHRSVKP PIFSCFGDIA LAIGENFEKY LIYAMPMLQS AAELSAHAVA DDDDILEYTN QLRNGILEAY
701: SGILQGFKSS PKTQLLMPYA YHILQFIDTL YSEKDMDDAV MKTAIGVLGD LADTLGSHVG PLINQSVSSK GFLEECLSSD DGLIKESADW AKLAISRAVS
801: G
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.