Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
23128297
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G088700.1 | Wheat | cytosol | 99.89 | 99.89 |
| TraesCS5D01G095100.1 | Wheat | golgi | 99.77 | 99.77 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 99.31 | 99.31 |
| TraesCS5A01G077200.1 | Wheat | golgi | 97.02 | 97.02 |
| EES16185 | Sorghum | cytosol | 94.38 | 94.38 |
| Os12t0568800-01 | Rice | plasma membrane | 76.03 | 94.31 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 79.01 | 86.02 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 82.0 | 85.12 |
| PGSC0003DMT400047662 | Potato | cytosol | 82.91 | 83.01 |
| PGSC0003DMT400050414 | Potato | cytosol | 82.0 | 82.37 |
| Zm00001d041556_P002 | Maize | cytosol | 93.12 | 82.27 |
| Solyc06g052030.2.1 | Tomato | plastid | 73.51 | 81.86 |
| KRH41369 | Soybean | cytosol, endoplasmic reticulum, nucleus | 80.85 | 81.03 |
| KRH60084 | Soybean | cytosol, endoplasmic reticulum, nucleus | 80.16 | 80.34 |
| CDY35657 | Canola | cytosol | 79.13 | 79.49 |
| CDY14379 | Canola | cytosol | 79.01 | 79.38 |
| Bra003054.1-P | Field mustard | cytosol | 78.9 | 79.26 |
| AT5G53480.1 | Thale cress | cytosol | 79.01 | 79.2 |
| GSMUA_Achr5P09570_001 | Banana | cytosol | 21.79 | 78.51 |
| KRH53541 | Soybean | cytosol | 77.87 | 77.96 |
| KRH64395 | Soybean | peroxisome | 68.92 | 77.35 |
| VIT_16s0098g01630.t01 | Wine grape | plastid | 83.94 | 77.05 |
| Solyc03g082940.2.1 | Tomato | plastid | 82.8 | 75.68 |
| Zm00001d030694_P002 | Maize | mitochondrion | 92.66 | 75.23 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 28.9 | 67.38 |
| TraesCS1A01G222800.2 | Wheat | golgi, unclear | 61.81 | 62.1 |
| TraesCS1A01G065600.1 | Wheat | cytosol | 59.75 | 59.95 |
| TraesCS4A01G111400.1 | Wheat | endoplasmic reticulum | 56.77 | 56.12 |
| TraesCS1A01G065000.1 | Wheat | cytosol | 20.87 | 53.69 |
| TraesCS2A01G435400.1 | Wheat | cytosol | 31.54 | 34.46 |
| TraesCS3A01G325000.1 | Wheat | cytosol | 20.41 | 34.23 |
| TraesCS2A01G562500.1 | Wheat | golgi | 19.15 | 18.62 |
| TraesCS3A01G329100.1 | Wheat | cytosol, mitochondrion | 13.53 | 12.03 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0008565 | InterPro:HEAT | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
| InterPro:KPNB1_plant | PFAM:PF02985 | PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 |
| PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS5A01G082600 | EnsemblPlants:TraesCS5A01G082600.1 | SEG:seg |
Description
No Description!
Coordinates
chr5A:-:107387460..107393359
Molecular Weight (calculated)
95942.9 Da
IEP (calculated)
4.372
GRAVY (calculated)
-0.022
Length
872 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLDVTQILL SAQSADGSIR KHAEESLKQF QEQNLPGFLL SLSTELATNE KPEESRRLAG LILKNALDAK EQHRKNELFQ RWLALDAGVK AQVKALLLQT
101: LSSPVASARS TSSQVIAKIA GIEIPQKQWP ELIGSLLSNI HQVQPNVKQA TLETLGYLCE EVSPEAVDQD QVNKILTAVV QGMNASEGNS EVRLAATRAL
201: YNALGFAQVN FSNDMERDYI MRVVCEATQS PDVKIRQAAF ECLVAISSTY YDKLATYMQD IFNITAKAVR GDEESVALQA MEFWSSICDE EIDILDEYSS
301: EFTADSDVPC YYFIKQALPA LVPMLLETLL KQEDDQDLDE GAWNLAMAGG TCLGLVARTV GDDIVPLVMP FVEENITKPE WRHREAATYA FGSILEGPSA
401: DKLTPLVNVA LNFMLSALVK DPNNHVKDTT AWTLGRIFEF LHGSALETAP VITAENCQQI LTVLLQSMKD VPNVAEKACG ALYFLAQGYV DAGSASPLSP
501: FFQDIVQSLL MTSHREDAGE SRLRTAAYET LNEVVRCSTE ETAPIVMQLV PVIMMELHNT LEAGKLSTDE REKRSDLQGL LCGCLQVIIQ KLGGMESTKF
601: AFLQYADQMM DLFLRVFACR NATVHEEAML AIGALAYAAG SNFAKYMAQF YQYLEMGLQN FEEYQVCAIT VGVVGDLCRA LEDKILPYCD GIMTQLLKDL
701: SSNQLHRSVK PPIFSCFGDI ALAIGENFEK YLIYAMPMLQ SAADLSAHTT ATDDEMLDYT NQLRNGILEA YSGILQGFKS SPKTQLLMPY APHILQFLDA
801: LHNGKDMDDS VMKTAIGVLG DLADTLGVNA GPLINQSTSS KQFLDECLSS DDPLVKESAD WARIAISRAV SG
101: LSSPVASARS TSSQVIAKIA GIEIPQKQWP ELIGSLLSNI HQVQPNVKQA TLETLGYLCE EVSPEAVDQD QVNKILTAVV QGMNASEGNS EVRLAATRAL
201: YNALGFAQVN FSNDMERDYI MRVVCEATQS PDVKIRQAAF ECLVAISSTY YDKLATYMQD IFNITAKAVR GDEESVALQA MEFWSSICDE EIDILDEYSS
301: EFTADSDVPC YYFIKQALPA LVPMLLETLL KQEDDQDLDE GAWNLAMAGG TCLGLVARTV GDDIVPLVMP FVEENITKPE WRHREAATYA FGSILEGPSA
401: DKLTPLVNVA LNFMLSALVK DPNNHVKDTT AWTLGRIFEF LHGSALETAP VITAENCQQI LTVLLQSMKD VPNVAEKACG ALYFLAQGYV DAGSASPLSP
501: FFQDIVQSLL MTSHREDAGE SRLRTAAYET LNEVVRCSTE ETAPIVMQLV PVIMMELHNT LEAGKLSTDE REKRSDLQGL LCGCLQVIIQ KLGGMESTKF
601: AFLQYADQMM DLFLRVFACR NATVHEEAML AIGALAYAAG SNFAKYMAQF YQYLEMGLQN FEEYQVCAIT VGVVGDLCRA LEDKILPYCD GIMTQLLKDL
701: SSNQLHRSVK PPIFSCFGDI ALAIGENFEK YLIYAMPMLQ SAADLSAHTT ATDDEMLDYT NQLRNGILEA YSGILQGFKS SPKTQLLMPY APHILQFLDA
801: LHNGKDMDDS VMKTAIGVLG DLADTLGVNA GPLINQSTSS KQFLDECLSS DDPLVKESAD WARIAISRAV SG
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.