Factsheet for TraesCS1A01G065000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13277	Sorghum	cytosol	63.42	29.33
TraesCS1A01G222800.2	Wheat	golgi, unclear	66.08	25.81
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	66.08	25.81
TraesCS1A01G065600.1	Wheat	cytosol	65.78	25.66
AT3G08947.1	Thale cress	cytosol	49.56	25.57
Zm00001d038021_P001	Maize	plastid	65.49	25.26
EES19347	Sorghum	cytosol	64.31	25.06
Zm00001d010512_P001	Maize	plastid	63.42	24.54
PGSC0003DMT400068505	Potato	cytosol	56.05	21.76
TraesCS4A01G111400.1	Wheat	endoplasmic reticulum	56.05	21.54
VIT_08s0058g00270.t01	Wine grape	cytosol	54.87	21.33
Bra029733.1-P	Field mustard	cytosol	53.98	20.99
CDY44668	Canola	cytosol	53.98	20.96
TraesCS5A01G082600.1	Wheat	golgi	53.69	20.87
TraesCS5A01G077200.1	Wheat	golgi	53.39	20.76
CDY53085	Canola	cytosol	53.39	20.73
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	56.05	18.98
Bra029635.1-P	Field mustard	cytosol	12.68	17.41
CDY28068	Canola	cytosol	20.35	14.26
TraesCS3A01G325000.1	Wheat	cytosol	18.88	12.31
TraesCS2A01G435400.1	Wheat	cytosol	28.61	12.16
TraesCS2A01G562500.1	Wheat	golgi	17.4	6.58
TraesCS3A01G329100.1	Wheat	cytosol, mitochondrion	9.44	3.26

Protein Annotations

EnsemblPlants:TraesCS1A01G065000.1	EnsemblPlantsGene:TraesCS1A01G065000	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0008565	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:IPR011989	InterPro:KPNB1_plant	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SEG:seg	SUPFAM:SSF48371
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:-:47209815..47211960

Molecular Weight (calculated)

37500.6 Da

IEP (calculated)

4.655

GRAVY (calculated)

0.222

Length

339 amino acids

Sequence
(BLAST)

001: MAQHGASAAV QQGILEVLGY VCEEFPPEHL EQDQAIPLLV PMLLETLLNE EGYHEHADNV RNISMIGAKC LGLIARTVGD AIVPLVMPFV KVNITNLDWH
101: CREAATFTFS SILEGPSVEK LTPLVHARLD FLVNSMKDLN NQVIIQKLSN SDVMSVISQT ADQLMFLFPC VFACPSSTVH EKAILAICQV AYGIREAGLQ
201: NKEEYQICSI SVWVMGDICR AIEDKMQPFC DCIMTVLFKD LGDIALAIGE NVEKYLQYAM PVLQGAAELV VLDQSNEDTI VHHNQLRHGI FEAYSGILHD
301: KSKTRILGRR EYLFVRDESV TKAAVAALSD LADILGLIS

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.