CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19347	Sorghum	cytosol	95.91	80.8
Zm00001d038021_P001	Maize	plastid	95.5	79.64
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	88.81	75.0
TraesCS1D01G224400.2	Wheat	golgi	87.72	74.08
TraesCS1A01G222800.2	Wheat	golgi, unclear	87.59	73.96
TraesCS1B01G236100.3	Wheat	cytosol	87.72	73.91
HORVU1Hr1G060180.2	Barley	cytosol	87.04	73.5
TraesCS1A01G065600.1	Wheat	cytosol	82.54	69.62
TraesCS1B01G083800.1	Wheat	cytosol	82.26	69.39
TraesCS1D01G066600.1	Wheat	cytosol	82.67	69.02
AT3G08947.1	Thale cress	cytosol	59.21	66.06
TraesCS1A01G065000.1	Wheat	cytosol	29.33	63.42
HORVU1Hr1G013580.2	Barley	cytosol, plastid	82.13	62.45
VIT_08s0058g00270.t01	Wine grape	cytosol	68.62	57.68
PGSC0003DMT400068505	Potato	cytosol	68.08	57.16
Bra029733.1-P	Field mustard	cytosol	66.71	56.08
CDY44668	Canola	cytosol	66.71	56.01
CDY53085	Canola	cytosol	66.58	55.9
EES16185	Sorghum	cytosol	60.85	51.15
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	68.08	49.85
TraesCS3D01G318400.1	Wheat	cytosol, peroxisome, plastid	43.93	49.39
TraesCS3A01G325000.1	Wheat	cytosol	31.38	44.23
TraesCS7B01G222000.1	Wheat	cytosol	49.8	44.03
TraesCS5D01G042900.2	Wheat	cytosol	44.2	38.43
TraesCS5B01G034200.1	Wheat	cytosol	43.11	38.12
TraesCS5D01G057000.1	Wheat	cytosol	43.25	35.74
TraesCS5B01G051300.1	Wheat	cytosol	42.7	35.29
TraesCS5D01G022500.1	Wheat	cytosol	33.83	34.93
TraesCS2D01G341200.1	Wheat	cytosol	38.74	31.84
TraesCS2A01G435400.1	Wheat	cytosol	33.29	30.58
TraesCS2B01G506500.1	Wheat	cytosol	37.11	30.09
TraesCS2D01G480800.1	Wheat	cytosol	36.97	30.08
TraesCS2B01G362200.1	Wheat	cytosol	27.83	29.31
TraesCS2D01G480100.1	Wheat	cytosol	37.11	29.25
TraesCS2B01G505600.1	Wheat	cytosol	36.97	28.95
TraesCS2D01G434400.1	Wheat	cytosol	18.96	28.08
Bra029635.1-P	Field mustard	cytosol	9.28	27.53
CDY28068	Canola	cytosol	17.19	26.03
EES11709	Sorghum	cytosol	18.55	15.3
OQU83489	Sorghum	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	EntrezGene:8074036	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5YMG4
EnsemblPlants:EES13277	ProteinID:EES13277	ProteinID:EES13277.1	GO:GO:0000060	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635
GO:GO:0005737	GO:GO:0006607	GO:GO:0006610	GO:GO:0006810	GO:GO:0006913	GO:GO:0008139
GO:GO:0008150	GO:GO:0008565	GO:GO:0016020	GO:GO:0031965	GO:GO:0034399	InterPro:IPR011989
InterPro:KPNB1_plant	PFAM:PF13513	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	EnsemblPlantsGene:SORBI_3007G022000	SUPFAM:SSF48371
UniParc:UPI0001A87783	RefSeq:XP_002443782.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:2029763..2033207

Molecular Weight (calculated)

80420.4 Da

IEP (calculated)

4.204

GRAVY (calculated)

0.064

Length

733 amino acids

Sequence
(BLAST)

001: MTSPGASAPL KQATLEALGY VCEEISPLDM EQDQVNAVLT AVVQGMNQTE LSPEVRLAAV KALYNALDIA VSNFANEMER NYIMKVVCET AVSKEVEIRQ
101: AAFECLVAIA STYYPHLDPY MQTIFNLTAN AVKGDEEPVA LQAVEFWSAI CDEEIMLQDE YEGSEDGNST AHFCFIEKAL PSLVPMLLEA LLKQEEDQDQ
201: DDNVWNISMS GGTCLGLISK TVGDAVVPLV MPFVEANITK PDWHCREAAT FAFGSILEGP SVEKLAPLVQ AGLDFLLNTM NDTNSQVKDT TAWTLGRVFE
301: LLHSPDGANP IINNSNLPRI MSVLLQSSKD APNVAEKVCG AIYFLAQGYE DAESMSSMLT PYLPNIIAAL LSAADRADTT HFRLRASAYE ALNEIVRVSN
401: IPETSGIIGQ LLQEIMRRLN LTFDLHILSS GDKEKQSDLQ ALLCGVLQVI IQKLSSTDAK SIISQTADQL MMLFLRVFAC HNSTVHEEAM LAIGALAYAT
501: GPDFVKYMPN FFTYLEAGLQ NYEEYQVCSI SVGVVGDICR ALEDKILPFC DSIMTVLLKN LSSSMLNRSV KPPIFSCFGD IALAIGENFE KYLPYAIPML
601: QGAAGLLGTL NQSDDDMVDY GNQLRRGIFE AYSGILQGIK GPKAQQMIPY ATHLLQFTEA VFKDRSRDDS VTKAAVAVLG DLADTLGESS KDLFKTQLFH
701: IEFLRECQAQ ELDDEVRDTA QWAQGMINLA VVS

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.