Factsheet for TraesCS5D01G022500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G042900.2	Wheat	cytosol	83.66	70.46
TraesCS5D01G057000.1	Wheat	cytosol	82.68	66.18
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	48.03	39.29
TraesCS1D01G224400.2	Wheat	golgi	47.61	38.94
EES19347	Sorghum	cytosol	45.92	37.47
Zm00001d038021_P001	Maize	plastid	46.34	37.43
TraesCS1D01G066600.1	Wheat	cytosol	46.2	37.36
Zm00001d010512_P001	Maize	plastid	46.06	37.33
TraesCS2D01G341200.1	Wheat	cytosol	46.2	36.77
TraesCS3D01G318400.1	Wheat	cytosol, peroxisome, plastid	32.54	35.43
TraesCS2D01G480800.1	Wheat	cytosol	42.96	33.85
EES13277	Sorghum	cytosol	34.93	33.83
CDY53085	Canola	cytosol	40.7	33.1
VIT_08s0058g00270.t01	Wine grape	cytosol	40.56	33.03
TraesCS2D01G480100.1	Wheat	cytosol	43.24	33.01
Bra029733.1-P	Field mustard	cytosol	40.42	32.91
CDY44668	Canola	cytosol	40.42	32.88
PGSC0003DMT400068505	Potato	cytosol	39.58	32.19
TraesCS4D01G193700.1	Wheat	endoplasmic reticulum	39.44	31.75
TraesCS2D01G434400.1	Wheat	cytosol	21.69	31.11
TraesCS5D01G094600.1	Wheat	cytosol	37.18	30.28
TraesCS5D01G095100.1	Wheat	golgi	36.76	29.93
AT3G08947.1	Thale cress	cytosol	27.32	29.53
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	39.86	28.27
CDY28068	Canola	cytosol	13.66	20.04
Bra029635.1-P	Field mustard	cytosol	5.07	14.57
TraesCS2D01G572700.1	Wheat	cytosol	14.93	11.82

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913	GO:GO:0008150
GO:GO:0008536	GO:GO:0008565	InterPro:IPR001494	InterPro:IPR011989	InterPro:Importin-beta_N	InterPro:KPNB1_plant
PFAM:PF03810	PFscan:PS50166	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913	SUPFAM:SSF48371
EnsemblPlantsGene:TraesCS5D01G022500	EnsemblPlants:TraesCS5D01G022500.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:15351899..15355804

Molecular Weight (calculated)

78848.7 Da

IEP (calculated)

7.219

GRAVY (calculated)

-0.054

Length

710 amino acids

Sequence
(BLAST)

001: MDNITHILKD AQDPDDNVRL EAEAKLKQLE ERNRPNFLLC LSAELSREAS PPECRCLAGT ILKNSVEGKY SEHNSILIKQ WISLDPRIKT EIKESLLMTL
101: GSSAPQARHA SSQIIGRLAY IEIPSRGWQD LIGRLLGNMA QQGASPPPKQ AILEALEYVF EEETLRFDKD TIDGVLDAVI RATSFQVRLV AVKALRNVHK
201: FANFANDDDC RNRIMTAICD AAKSDEAAEV KHAGFGCLAA IASNYYMELE PYMEPYSALQ LRLWTWKEAL SLKGPLLRNS LLVGWLMDGM EDSHMEVRGA
301: AACTLGRAFE LLHSPALDKR LFTNEDFPRV MAALSKSGKD VPQVSKEVYG AIYFLARGYD QSISSEVDLS KKKISSELSP FLTGVIDALL SASELDKKTP
401: LGLPASASAY GTLIEAVRVI NIWDLEAVLA IIVLMHRIMR RLNTALDAKA ISSDDKTNKH NLQALSCDVL HAIIEKLGNS LHADKVRESA PFMCLQFCRV
501: LTCDCSTARD KAALAIGALA RAVGPKFLDC MPIFLQYYSV KLFYPIYLEV ICTIFHALGD EILPCCDYMM GVLYKGLSQP KLKPQILACF GEIALAIGKI
601: FEDKYLQAVR KKLKEAANPR YYANVFDEDK VDYGIQLRQG ICKAYSGILR GIKDPKSGLK VAADLVEFIE AVSKDQKRGG RVTYAAVDAW AQFGLTVESW
701: KKGLISDLQR

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.