Factsheet for AT3G08947.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029733.1-P	Field mustard	cytosol	87.98	66.28
CDY44668	Canola	cytosol	87.98	66.21
CDY53085	Canola	cytosol	87.82	66.09
Os03t0294600-01	Rice	cytosol	33.64	59.57
EES13277	Sorghum	cytosol	66.06	59.21
VIT_08s0058g00270.t01	Wine grape	cytosol	73.97	55.73
PGSC0003DMT400068505	Potato	cytosol	72.3	54.41
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	66.67	50.46
GSMUA_Achr10P...	Banana	cytosol	64.08	50.06
GSMUA_Achr5P28110_001	Banana	cytosol	63.93	49.94
EES19347	Sorghum	cytosol	66.06	49.89
TraesCS1D01G224400.2	Wheat	golgi	65.91	49.88
TraesCS1A01G222800.2	Wheat	golgi, unclear	65.91	49.88
TraesCS1B01G236100.3	Wheat	cytosol	65.91	49.77
Zm00001d038021_P001	Maize	plastid	66.36	49.6
TraesCS1A01G065000.1	Wheat	cytosol	25.57	49.56
HORVU1Hr1G060180.2	Barley	cytosol	65.45	49.54
GSMUA_Achr8P01910_001	Banana	cytosol	60.27	49.32
Zm00001d010512_P001	Maize	plastid	65.6	49.2
TraesCS1A01G065600.1	Wheat	cytosol	64.08	48.45
TraesCS1B01G083800.1	Wheat	cytosol	63.62	48.1
TraesCS1D01G066600.1	Wheat	cytosol	64.08	47.95
TraesCS4A01G111400.1	Wheat	endoplasmic reticulum	63.77	47.51
TraesCS4B01G192500.1	Wheat	endoplasmic reticulum	63.47	47.28
TraesCS4D01G193700.1	Wheat	endoplasmic reticulum	63.47	47.28
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	71.84	47.15
AT5G53480.1	Thale cress	cytosol	59.51	44.94
HORVU1Hr1G013580.2	Barley	cytosol, plastid	63.77	43.46
HORVU4Hr1G055910.2	Barley	cytosol, plastid	63.62	43.23
TraesCS3D01G318400.1	Wheat	cytosol, peroxisome, plastid	41.25	41.56
TraesCS7B01G222000.1	Wheat	cytosol	42.31	33.53
TraesCS5D01G042900.2	Wheat	cytosol	38.51	30.01
TraesCS5B01G034200.1	Wheat	cytosol	37.75	29.92
Bra029635.1-P	Field mustard	cytosol	11.11	29.55
TraesCS3A01G325000.1	Wheat	cytosol	23.14	29.23
TraesCS5D01G057000.1	Wheat	cytosol	37.75	27.96
TraesCS5B01G051300.1	Wheat	cytosol	37.29	27.62
TraesCS5D01G022500.1	Wheat	cytosol	29.53	27.32
TraesCS2D01G341200.1	Wheat	cytosol	33.49	24.66
TraesCS2B01G506500.1	Wheat	cytosol	33.79	24.56
TraesCS2A01G435400.1	Wheat	cytosol	29.68	24.44
TraesCS2D01G480800.1	Wheat	cytosol	33.33	24.31
TraesCS2D01G480100.1	Wheat	cytosol	33.33	23.55
TraesCS2B01G505600.1	Wheat	cytosol	33.03	23.18
CDY28068	Canola	cytosol	16.44	22.31
TraesCS2D01G434400.1	Wheat	cytosol	15.83	21.01
TraesCS2B01G362200.1	Wheat	cytosol	21.46	20.26
AT2G16953.1	Thale cress	cytosol	1.52	15.62
AT2G16960.1	Thale cress	cytosol	12.94	15.4
AT2G16950.1	Thale cress	cytosol	18.72	13.74

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	EntrezGene:3768765	ProteinID:AEE74700.2	EMBL:AK229808	InterPro:ARM-like
InterPro:ARM-type_fold	ArrayExpress:AT3G08947	EnsemblPlantsGene:AT3G08947	RefSeq:AT3G08947	TAIR:AT3G08947	RefSeq:AT3G08947-TAIR-G
EnsemblPlants:AT3G08947.1	TAIR:AT3G08947.1	Unigene:At.21964	GO:GO:0000060	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005635	GO:GO:0005737	GO:GO:0005829	GO:GO:0006607	GO:GO:0006610	GO:GO:0006810
GO:GO:0006886	GO:GO:0006913	GO:GO:0008139	GO:GO:0008150	GO:GO:0008536	GO:GO:0008565
GO:GO:0015031	GO:GO:0016020	GO:GO:0031965	GO:GO:0034399	InterPro:IPR011989	InterPro:KPNB1_plant
RefSeq:NP_001154598.2	PFAM:PF13513	PO:PO:0000293	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	UniProt:Q0WML1
SUPFAM:SSF48371	UniParc:UPI0000DB54B7	:	:	:	:

Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]

Coordinates

chr3:+:2723153..2726951

Molecular Weight (calculated)

72786.1 Da

IEP (calculated)

4.345

GRAVY (calculated)

0.000

Length

657 amino acids

Sequence
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.