Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G065600.1 | Wheat | cytosol | 97.04 | 98.04 |
| TraesCS1B01G083800.1 | Wheat | cytosol | 96.24 | 97.24 |
| HORVU1Hr1G013580.2 | Barley | cytosol, plastid | 95.1 | 86.62 |
| TraesCS1D01G224400.2 | Wheat | golgi | 84.74 | 85.71 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 84.4 | 85.37 |
| Zm00001d038021_P001 | Maize | plastid | 83.03 | 82.94 |
| EES19347 | Sorghum | cytosol | 82.12 | 82.87 |
| EES13277 | Sorghum | cytosol | 69.02 | 82.67 |
| Zm00001d010512_P001 | Maize | plastid | 80.87 | 81.05 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 65.83 | 66.28 |
| PGSC0003DMT400068505 | Potato | cytosol | 65.03 | 65.41 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 65.38 | 65.08 |
| Bra029733.1-P | Field mustard | cytosol | 64.35 | 64.79 |
| CDY44668 | Canola | cytosol | 64.35 | 64.72 |
| CDY53085 | Canola | cytosol | 64.24 | 64.6 |
| AT3G08947.1 | Thale cress | cytosol | 47.95 | 64.08 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 60.02 | 60.44 |
| TraesCS5D01G095100.1 | Wheat | golgi | 59.34 | 59.75 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 65.38 | 57.34 |
| TraesCS5D01G042900.2 | Wheat | cytosol | 46.36 | 48.28 |
| TraesCS3D01G318400.1 | Wheat | cytosol, peroxisome, plastid | 35.54 | 47.85 |
| TraesCS5D01G022500.1 | Wheat | cytosol | 37.36 | 46.2 |
| TraesCS5D01G057000.1 | Wheat | cytosol | 45.44 | 44.98 |
| TraesCS2D01G434400.1 | Wheat | cytosol | 23.35 | 41.41 |
| TraesCS2D01G341200.1 | Wheat | cytosol | 39.29 | 38.68 |
| TraesCS2D01G480800.1 | Wheat | cytosol | 38.95 | 37.96 |
| TraesCS2D01G480100.1 | Wheat | cytosol | 38.61 | 36.45 |
| CDY28068 | Canola | cytosol | 18.91 | 34.3 |
| Bra029635.1-P | Field mustard | cytosol | 7.18 | 25.51 |
| TraesCS2D01G572700.1 | Wheat | cytosol | 19.13 | 18.73 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant |
| PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SMART:SM00913 |
| SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS1D01G066600 | EnsemblPlants:TraesCS1D01G066600.1 | : | : | : |
Description
No Description!
Coordinates
chr1D:-:48021551..48024273
Molecular Weight (calculated)
96781.0 Da
IEP (calculated)
4.322
GRAVY (calculated)
0.050
Length
878 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVRTVDTAM DITQILLAAQ SPDGNLRSVA ESSLKLFQEQ NLPRFLLSLS VELSNDGRPP ESRRLAGIIL KNTLDAKDCS RKELLGQQWV SLDLSIKSRI
101: KESLLLTLGS SVPDARQASS QVIAKVASIE MPRREWPDLI AKLLGNMTQQ GASAPLKQAT LEALGYVCEE ISPEHLEQDQ VNAVLTAVVQ GMNQAELSVE
201: VRLAAVKALY NALYFADSNF ANDMERNYIM KVICETAVSN EVEIRQAAFE CLVAIASIYY MHLEPYMQTV FNLTSNAVKG DEESVALQAI EFWSTVCDEE
301: IQLQEEYEGY DNADSSANFR FIEKALPSLV PMLLETLLKQ EEDQEQDDNV WNISMSSGTC LGLIAKAVGD AIVPLVMPFV EANITNPDWH CREAATFAFG
401: SILDGPSLPK LAPLVHAGLD FLLNAMKDPN SQVKDTTAWT LGRVFEFLHS PTSVNPIVTS GNLTRIMTVL LESSKDAPNV AEKVCGAIYF LAQGYENTAD
501: SISSVLTPYL PSVITTLLSA PDCADATHFR LRSSAYEALN EIVRVSNIDE TSSIIGQLLQ EVMRRLNLTF DLEIFSPGDK ENQSDLQALL CGVLQVIVPK
601: LSNSDAESII TQNADRLMFL FLRVFACHGS TVHEEAMLAI GVLADAIGPD FVKYMPEFFK YLEAGLQNHE EYQVCSISVG VVGDICRTLE DKVLPFCDGI
701: MTVLLKDLSN PMLNRSVKPP IFSCFGDIAL AIGENFEKYL PYAMPMLQGA AELLVVLDQS DDDMVHYGNQ LRRGIFEAYS GILQGIKGPK AQLMVPYATH
801: LLQFTEAVYK DGSRDESVTK AAVAVLGDLA DTLGPISKDL FRNHLFHVEF FRECLDSDEE VREAASWAQG MINQAVVA
101: KESLLLTLGS SVPDARQASS QVIAKVASIE MPRREWPDLI AKLLGNMTQQ GASAPLKQAT LEALGYVCEE ISPEHLEQDQ VNAVLTAVVQ GMNQAELSVE
201: VRLAAVKALY NALYFADSNF ANDMERNYIM KVICETAVSN EVEIRQAAFE CLVAIASIYY MHLEPYMQTV FNLTSNAVKG DEESVALQAI EFWSTVCDEE
301: IQLQEEYEGY DNADSSANFR FIEKALPSLV PMLLETLLKQ EEDQEQDDNV WNISMSSGTC LGLIAKAVGD AIVPLVMPFV EANITNPDWH CREAATFAFG
401: SILDGPSLPK LAPLVHAGLD FLLNAMKDPN SQVKDTTAWT LGRVFEFLHS PTSVNPIVTS GNLTRIMTVL LESSKDAPNV AEKVCGAIYF LAQGYENTAD
501: SISSVLTPYL PSVITTLLSA PDCADATHFR LRSSAYEALN EIVRVSNIDE TSSIIGQLLQ EVMRRLNLTF DLEIFSPGDK ENQSDLQALL CGVLQVIVPK
601: LSNSDAESII TQNADRLMFL FLRVFACHGS TVHEEAMLAI GVLADAIGPD FVKYMPEFFK YLEAGLQNHE EYQVCSISVG VVGDICRTLE DKVLPFCDGI
701: MTVLLKDLSN PMLNRSVKPP IFSCFGDIAL AIGENFEKYL PYAMPMLQGA AELLVVLDQS DDDMVHYGNQ LRRGIFEAYS GILQGIKGPK AQLMVPYATH
801: LLQFTEAVYK DGSRDESVTK AAVAVLGDLA DTLGPISKDL FRNHLFHVEF FRECLDSDEE VREAASWAQG MINQAVVA
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.