Factsheet for VIT_08s0058g00270.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0092g00320.t01	Wine grape	cytosol	4.01	85.37
PGSC0003DMT400068505	Potato	cytosol	77.87	77.78
Bra029733.1-P	Field mustard	cytosol	75.23	75.23
CDY44668	Canola	cytosol	75.23	75.14
CDY53085	Canola	cytosol	75.11	75.03
GSMUA_Achr8P01910_001	Banana	cytosol	68.81	74.72
GSMUA_Achr5P28110_001	Banana	cytosol	71.44	74.08
AT3G08947.1	Thale cress	cytosol	55.73	73.97
GSMUA_Achr10P...	Banana	cytosol	70.99	73.6
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	70.07	70.39
TraesCS1D01G224400.2	Wheat	golgi	69.84	70.16
HORVU1Hr1G060180.2	Barley	cytosol	69.84	70.16
TraesCS1A01G222800.2	Wheat	golgi, unclear	69.72	70.05
TraesCS1B01G236100.3	Wheat	cytosol	69.84	70.0
EES19347	Sorghum	cytosol	69.72	69.89
Zm00001d038021_P001	Maize	plastid	70.18	69.62
EES13277	Sorghum	cytosol	57.68	68.62
Zm00001d010512_P001	Maize	plastid	68.69	68.38
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	78.1	68.03
TraesCS1A01G065600.1	Wheat	cytosol	66.51	66.74
TraesCS1B01G083800.1	Wheat	cytosol	66.06	66.28
TraesCS1D01G066600.1	Wheat	cytosol	66.28	65.83
TraesCS4D01G193700.1	Wheat	endoplasmic reticulum	66.51	65.76
TraesCS4B01G192500.1	Wheat	endoplasmic reticulum	66.51	65.76
TraesCS4A01G111400.1	Wheat	endoplasmic reticulum	66.28	65.53
Os03t0294600-01	Rice	cytosol	27.87	65.5
HORVU4Hr1G055910.2	Barley	cytosol, plastid	66.63	60.08
HORVU1Hr1G013580.2	Barley	cytosol, plastid	66.17	59.85
VIT_16s0098g01630.t01	Wine grape	plastid	63.42	58.21
TraesCS1A01G065000.1	Wheat	cytosol	21.33	54.87
TraesCS7B01G222000.1	Wheat	cytosol	46.33	48.73
TraesCS5D01G042900.2	Wheat	cytosol	42.2	43.65
TraesCS5B01G034200.1	Wheat	cytosol	41.4	43.55
TraesCS3D01G318400.1	Wheat	cytosol, peroxisome, plastid	31.54	42.18
TraesCS5D01G022500.1	Wheat	cytosol	33.03	40.56
TraesCS5D01G057000.1	Wheat	cytosol	40.6	39.91
TraesCS5B01G051300.1	Wheat	cytosol	40.02	39.35
TraesCS3A01G325000.1	Wheat	cytosol	23.28	39.04
CDY28068	Canola	cytosol	20.87	37.6
TraesCS2D01G434400.1	Wheat	cytosol	21.33	37.58
TraesCS2D01G341200.1	Wheat	cytosol	35.32	34.53
TraesCS2A01G435400.1	Wheat	cytosol	31.31	34.21
TraesCS2B01G362200.1	Wheat	cytosol	26.83	33.62
TraesCS2B01G506500.1	Wheat	cytosol	33.95	32.74
TraesCS2D01G480800.1	Wheat	cytosol	33.72	32.63
TraesCS2D01G480100.1	Wheat	cytosol	33.72	31.61
Bra029635.1-P	Field mustard	cytosol	8.94	31.58
TraesCS2B01G505600.1	Wheat	cytosol	33.26	30.98
VIT_18s0001g00910.t01	Wine grape	cytosol	20.41	20.07
VIT_03s0038g02830.t01	Wine grape	cytosol	18.92	18.42

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100241948	wikigene:100241948	MapMan:23.5.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:CBI18129	ProteinID:CBI18129.3	UniProt:D7SQV1	EMBL:FN594967	GO:GO:0000060	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005635	GO:GO:0005737	GO:GO:0005829	GO:GO:0006607	GO:GO:0006610
GO:GO:0006810	GO:GO:0006886	GO:GO:0006913	GO:GO:0008139	GO:GO:0008150	GO:GO:0008536
GO:GO:0008565	GO:GO:0016020	GO:GO:0031965	GO:GO:0034399	InterPro:IPR001494	InterPro:IPR011989
InterPro:Importin-beta_N	InterPro:KPNB1_plant	EntrezGene:LOC100241948	wikigene:LOC100241948	PFAM:PF03810	PFAM:PF13513
PFscan:PS50166	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913	SUPFAM:SSF48371	TIGR:TC56453
UniParc:UPI00015CCB9F	ArrayExpress:VIT_08s0058g00270	EnsemblPlantsGene:VIT_08s0058g00270	EnsemblPlants:VIT_08s0058g00270.t01	unigene:Vvi.14197	RefSeq:XP_002269769
RefSeq:XP_002269769.1	RefSeq:XP_010653407.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:9105030..9109273

Molecular Weight (calculated)

96618.8 Da

IEP (calculated)

4.455

GRAVY (calculated)

-0.036

Length

872 amino acids

Sequence
(BLAST)

001: MAVEITQFLL YAQSADAKIR TEAESNLRQF QEQNLPAFLL SLSVELSNNE KPTESRRLAG IVLKNSLDAK DAARKEHLVQ QWVAMDISIK SQIKDLLLRT
101: LGSSVTEASH TSAQVIAKIA SIEIPRKEWP ELIGSLLVNM TQQDRPAALK QATLETLGYV CEEISHQDLV QDEVNSVLTA VVQGMNLAEH SSEVRLAATR
201: ALYNALDFAQ TNFENEMERN YIMKVVCETA MSKEAEIRQS AFECLVSIAS MYYEVLDPYM QTLFELTLKT VRGDEEAVAL QAIEFWSSIC DEEIELQEYE
301: SAESGDSGPH HSHFIEKALS SLVPMLLDTL LKQEDDQDQD DGVWNLSMAG GTCLGLVART VGDAIVPLVM PFVEANILKP EWRCREAATY AFGSILEGPT
401: IEKLSPLVYA GLDFLLNAMR DENRHVKDTT AWTLSRIFEL LHSPGSGFSV ISPANIQRVL GVLLESVKDA PNVAEKVCGA IYYLAQGYED AGTNSSLLSP
501: YLPQIISSLI ETAERTDGGD SKLRSSAYET LNEVVRCSNI VETSHIIAQL LPVIMNKLGQ TVEHQIMSSD DREKQGDLQA LLCGVLQVII QKLSNTDDTK
601: PIILQAADQI MILFLKVFAC RSSTVHEEAM LAIGALAYAT GPKFGKYMVE FHKYLEMGLQ NFEEYQVCAI TVGVVGDVCR AIDEDILPYC DGIMSHLVKD
701: LASGELHRSV KPAIFSCFGD IALAIGAHFE NYLHVAIQMM QGAAGLCSQM DTNDEEMVEY GNQLRRSIFE AYSGILQGFK NSKPELMLPH AEKLLQFIEL
801: VSRDRHREES VTKAAVAVMG DLADTLGSNM KILFKDRTFC ADFLGECLES DDEQLKETAT WTQGMIGRVL VS

Best Arabidopsis Sequence Match ( AT5G53480.1 )
(BLAST)

001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV

Arabidopsis Description

KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.