Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G480800.1 | Wheat | cytosol | 97.9 | 98.22 |
| TraesCS2B01G505600.1 | Wheat | cytosol | 78.43 | 75.75 |
| TraesCS2B01G362200.1 | Wheat | cytosol | 43.36 | 56.32 |
| TraesCS5B01G034200.1 | Wheat | cytosol | 39.05 | 42.58 |
| EES19347 | Sorghum | cytosol | 38.27 | 39.77 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 38.16 | 39.75 |
| Zm00001d038021_P001 | Maize | plastid | 38.38 | 39.48 |
| TraesCS5B01G051300.1 | Wheat | cytosol | 38.61 | 39.35 |
| TraesCS1B01G083800.1 | Wheat | cytosol | 37.72 | 39.24 |
| TraesCS1B01G236100.3 | Wheat | cytosol | 37.72 | 39.2 |
| Zm00001d010512_P001 | Maize | plastid | 37.61 | 38.81 |
| EES13277 | Sorghum | cytosol | 30.09 | 37.11 |
| Bra029733.1-P | Field mustard | cytosol | 34.29 | 35.55 |
| CDY44668 | Canola | cytosol | 34.29 | 35.51 |
| CDY53085 | Canola | cytosol | 34.29 | 35.51 |
| TraesCS7B01G222000.1 | Wheat | cytosol | 32.52 | 35.46 |
| TraesCS4B01G192500.1 | Wheat | endoplasmic reticulum | 33.63 | 34.47 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 33.08 | 34.29 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 32.85 | 34.06 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 32.74 | 33.95 |
| PGSC0003DMT400068505 | Potato | cytosol | 32.63 | 33.79 |
| AT3G08947.1 | Thale cress | cytosol | 24.56 | 33.79 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 32.74 | 29.57 |
| CDY28068 | Canola | cytosol | 13.94 | 26.03 |
| Bra029635.1-P | Field mustard | cytosol | 5.75 | 21.05 |
| TraesCS4B01G307300.1 | Wheat | cytosol | 1.77 | 15.53 |
| TraesCS2B01G624100.1 | Wheat | cytosol | 14.16 | 14.27 |
| TraesCS2B01G426000.1 | Wheat | cytosol | 5.64 | 14.01 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 |
| GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
| InterPro:KPNB1_plant | PFAM:PF03810 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SUPFAM:SSF48371 |
| EnsemblPlantsGene:TraesCS2B01G506500 | EnsemblPlants:TraesCS2B01G506500.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:703350081..703352881
Molecular Weight (calculated)
100612.0 Da
IEP (calculated)
4.883
GRAVY (calculated)
-0.135
Length
904 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESIDVSDA LAHASHPDNN IRSIGEDMLK RLQNLDLPNF LLYLSSELLR EGIPEESRAL AAITLKNSLD SKDPALKDAH KDLLCIKWLS LDPSIRSEIK
101: HKLLMTLEFD SRQSHSRHPS SKVIAKVIAR VACMEIPRNQ WLDLVGKLVD NMASSSSSLK QATLEVLQYI FEAKIPKVVK GDQVDVVMGS VISALNNQML
201: DSQVHLTALK ALLNILEFTK FEDHAWRNSI VAVCEVAGRI NSGAEIKEAA FECLVAIART CHTILEPYKE IMMSLTSQAL EGDVESLKFQ CIKLWITVFQ
301: EEIDWEEEGE EEEEEEEEKE KEDDDEEEAS SFIGPLCSFV PLLLQTYLKE EQGHLKQEDI WKQGDEGDGD ISMTGEQEEE GDENVEQEGV NLEDILEQDE
401: EEDETLQGIS MTCLGLAARI MKGGVVPLVM HFVQENLNGP HKIAALSPLG FILEGPSVKQ LAPLVHLLLV LMDHPEEGVR GRAAWTLGRL FKLVGAHRIV
501: RNEVVVLDRI MKLLIERSKD VPEVSVEVHG ALYFLARGYG EDAKSRSKSN SCELSPFVKP LIDALLCASD LARETPFCLL PSPYKALSEI VRVSDTGDLQ
601: VRQAVIGLMS HIMRRFNIVL NGHGAVSSVQ RKNQLEVLLC GLVEVLIHKL GSTLKGSAKC VLMLLCPLLT RESTSARNGA ALAIGALAHA IGADFGQHMP
701: TVLQYFSVKR LSPLYLEVIC DICHVLGKEG KEEEVVPCFD HIMEVLYQGM GELTLQPPIL SSIGQIALAI GEKFEKYLPP VMEKLIVMEE VAQLDQDPLG
801: DHSNKVREAI SKAYHGILGG ITDPKSGFKV GMALLDFTEK ERKRRDSDRR SRRTRTMTAR DTRTMKALVD ALSQLSPRVG VWSEALIRSM QEENTPSLNK
901: YKSV
101: HKLLMTLEFD SRQSHSRHPS SKVIAKVIAR VACMEIPRNQ WLDLVGKLVD NMASSSSSLK QATLEVLQYI FEAKIPKVVK GDQVDVVMGS VISALNNQML
201: DSQVHLTALK ALLNILEFTK FEDHAWRNSI VAVCEVAGRI NSGAEIKEAA FECLVAIART CHTILEPYKE IMMSLTSQAL EGDVESLKFQ CIKLWITVFQ
301: EEIDWEEEGE EEEEEEEEKE KEDDDEEEAS SFIGPLCSFV PLLLQTYLKE EQGHLKQEDI WKQGDEGDGD ISMTGEQEEE GDENVEQEGV NLEDILEQDE
401: EEDETLQGIS MTCLGLAARI MKGGVVPLVM HFVQENLNGP HKIAALSPLG FILEGPSVKQ LAPLVHLLLV LMDHPEEGVR GRAAWTLGRL FKLVGAHRIV
501: RNEVVVLDRI MKLLIERSKD VPEVSVEVHG ALYFLARGYG EDAKSRSKSN SCELSPFVKP LIDALLCASD LARETPFCLL PSPYKALSEI VRVSDTGDLQ
601: VRQAVIGLMS HIMRRFNIVL NGHGAVSSVQ RKNQLEVLLC GLVEVLIHKL GSTLKGSAKC VLMLLCPLLT RESTSARNGA ALAIGALAHA IGADFGQHMP
701: TVLQYFSVKR LSPLYLEVIC DICHVLGKEG KEEEVVPCFD HIMEVLYQGM GELTLQPPIL SSIGQIALAI GEKFEKYLPP VMEKLIVMEE VAQLDQDPLG
801: DHSNKVREAI SKAYHGILGG ITDPKSGFKV GMALLDFTEK ERKRRDSDRR SRRTRTMTAR DTRTMKALVD ALSQLSPRVG VWSEALIRSM QEENTPSLNK
901: YKSV
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.