Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G057000.1 | Wheat | cytosol | 98.2 | 98.2 |
| TraesCS5B01G034200.1 | Wheat | cytosol | 80.5 | 86.13 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 46.22 | 47.23 |
| TraesCS1B01G236100.3 | Wheat | cytosol | 45.55 | 46.44 |
| TraesCS1B01G083800.1 | Wheat | cytosol | 44.42 | 45.34 |
| EES19347 | Sorghum | cytosol | 44.19 | 45.06 |
| Zm00001d038021_P001 | Maize | plastid | 44.64 | 45.05 |
| Zm00001d010512_P001 | Maize | plastid | 44.42 | 44.98 |
| EES13277 | Sorghum | cytosol | 35.29 | 42.7 |
| TraesCS7B01G222000.1 | Wheat | cytosol | 39.01 | 41.74 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 39.35 | 40.02 |
| PGSC0003DMT400068505 | Potato | cytosol | 39.35 | 39.98 |
| TraesCS2B01G362200.1 | Wheat | cytosol | 31.34 | 39.94 |
| CDY53085 | Canola | cytosol | 38.9 | 39.52 |
| Bra029733.1-P | Field mustard | cytosol | 38.67 | 39.33 |
| CDY44668 | Canola | cytosol | 38.67 | 39.29 |
| TraesCS2B01G506500.1 | Wheat | cytosol | 39.35 | 38.61 |
| TraesCS4B01G192500.1 | Wheat | endoplasmic reticulum | 38.11 | 38.32 |
| AT3G08947.1 | Thale cress | cytosol | 27.62 | 37.29 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 36.41 | 37.04 |
| TraesCS2B01G505600.1 | Wheat | cytosol | 38.44 | 36.43 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 35.74 | 36.35 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 40.14 | 35.56 |
| CDY28068 | Canola | cytosol | 15.45 | 28.31 |
| TraesCS4B01G307300.1 | Wheat | cytosol | 3.04 | 26.21 |
| Bra029635.1-P | Field mustard | cytosol | 6.65 | 23.89 |
| TraesCS2B01G624100.1 | Wheat | cytosol | 15.67 | 15.5 |
| TraesCS2B01G426000.1 | Wheat | cytosol | 5.86 | 14.29 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant |
| PFAM:PF03810 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 |
| EnsemblPlantsGene:TraesCS5B01G051300 | EnsemblPlants:TraesCS5B01G051300.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:-:55621178..55626989
Molecular Weight (calculated)
97774.2 Da
IEP (calculated)
5.885
GRAVY (calculated)
-0.090
Length
887 amino acids
Sequence
(BLAST)
(BLAST)
001: MPKRKQETTD GPNPHRRPLA ATATASPPPG AGAGASGDPA PAPLDGQLIQ PAMDNITQIL KDAQDPDNNI RLVAECKLKQ LQERNRPNFL LSLSAELSSD
101: ASPPECRCLA GIMLKNSVEG KYSEDNSILI EQWNNLDQCI KSQIKESLLI TLGSLAPQAR HASSQIIGRL AYIEIPSQGW QDLIGRLLHN MAPQGASPAT
201: LKQATLEALE HVFEEKTLRF EKDTINGVLD AVIRAMNHQA EKSFQVRVAA VKALQNVHKF ADFASDDDCR NRIMTAISDA AKSDEAVEVK HAAFGCLTAI
301: ASKYYMELEP YMETTLSLTT EALGLEGGVD ETAVLECIEF WSTICRKVIK LREKRKRFPR VILTADCHFL ENPLCSLVPL LLQTLSLHQE RDVDELNIFM
401: SAMTCLGLVA RTIGDAVVPF ARQFIEGNIK VADWRSRKTA ISVLGVILEG PSIEKLAPVV GLLMDKMEDP HMEIRGTATC TLGQVFELLH SPALDKRFFT
501: NEDFPRIMAA LSKRGKDVPE VSKEVCEAIY FLARGYDVPI SSEVDHSKKK ISSELSPFLS GVIDAILSAS ELDKKTPFGL PASASAYGAL IEIVRVSNIW
601: DFEAVIAIMD LMPRIMRRLN TALDAKAISS DDKTNRQNLQ ALLCDVLHAI IEKLGNSLHA DKVRESAQSM SLQFCRVLTC DCSTARDKAA LAVGALARAV
701: GPKFLDHMPI FLQYYSVKLF SPIYLEVIGT IFHVLGDEIL PCCDDMMDVL YEGLSKPKLK PQILACFGEI ALAIGKHFEE YHLQAVRKKL KEAANPRYYA
801: NVSDEDKVDY GNQLRQGICK AYSGILRGIK DQKSGLKVAA DLVEFIEAVS EDESRDARVT SAAVDVLDQF GFMAESWKKG LISELGR
101: ASPPECRCLA GIMLKNSVEG KYSEDNSILI EQWNNLDQCI KSQIKESLLI TLGSLAPQAR HASSQIIGRL AYIEIPSQGW QDLIGRLLHN MAPQGASPAT
201: LKQATLEALE HVFEEKTLRF EKDTINGVLD AVIRAMNHQA EKSFQVRVAA VKALQNVHKF ADFASDDDCR NRIMTAISDA AKSDEAVEVK HAAFGCLTAI
301: ASKYYMELEP YMETTLSLTT EALGLEGGVD ETAVLECIEF WSTICRKVIK LREKRKRFPR VILTADCHFL ENPLCSLVPL LLQTLSLHQE RDVDELNIFM
401: SAMTCLGLVA RTIGDAVVPF ARQFIEGNIK VADWRSRKTA ISVLGVILEG PSIEKLAPVV GLLMDKMEDP HMEIRGTATC TLGQVFELLH SPALDKRFFT
501: NEDFPRIMAA LSKRGKDVPE VSKEVCEAIY FLARGYDVPI SSEVDHSKKK ISSELSPFLS GVIDAILSAS ELDKKTPFGL PASASAYGAL IEIVRVSNIW
601: DFEAVIAIMD LMPRIMRRLN TALDAKAISS DDKTNRQNLQ ALLCDVLHAI IEKLGNSLHA DKVRESAQSM SLQFCRVLTC DCSTARDKAA LAVGALARAV
701: GPKFLDHMPI FLQYYSVKLF SPIYLEVIGT IFHVLGDEIL PCCDDMMDVL YEGLSKPKLK PQILACFGEI ALAIGKHFEE YHLQAVRKKL KEAANPRYYA
801: NVSDEDKVDY GNQLRQGICK AYSGILRGIK DQKSGLKVAA DLVEFIEAVS EDESRDARVT SAAVDVLDQF GFMAESWKKG LISELGR
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.