Factsheet for TraesCS2B01G362200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G341200.1	Wheat	cytosol	95.55	74.55
TraesCS2B01G505600.1	Wheat	cytosol	58.76	43.7
TraesCS2B01G506500.1	Wheat	cytosol	56.32	43.36
TraesCS5B01G034200.1	Wheat	cytosol	40.09	33.66
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	40.95	32.83
TraesCS1B01G236100.3	Wheat	cytosol	39.8	31.84
EES19347	Sorghum	cytosol	39.51	31.61
Zm00001d038021_P001	Maize	plastid	39.8	31.51
TraesCS5B01G051300.1	Wheat	cytosol	39.94	31.34
Zm00001d010512_P001	Maize	plastid	39.08	31.05
TraesCS1B01G083800.1	Wheat	cytosol	38.65	30.96
EES13277	Sorghum	cytosol	29.31	27.83
Bra029733.1-P	Field mustard	cytosol	33.91	27.06
CDY44668	Canola	cytosol	33.91	27.03
CDY53085	Canola	cytosol	33.76	26.92
TraesCS7B01G222000.1	Wheat	cytosol	32.04	26.9
TraesCS4B01G192500.1	Wheat	endoplasmic reticulum	34.05	26.87
VIT_08s0058g00270.t01	Wine grape	cytosol	33.62	26.83
TraesCS5B01G088400.1	Wheat	cytosol	33.62	26.83
TraesCS5B01G088700.1	Wheat	cytosol	32.76	26.15
PGSC0003DMT400068505	Potato	cytosol	32.61	26.0
CDY28068	Canola	cytosol	17.24	24.79
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	33.05	22.98
AT3G08947.1	Thale cress	cytosol	20.26	21.46
Bra029635.1-P	Field mustard	cytosol	5.32	14.98
TraesCS4B01G307300.1	Wheat	cytosol	1.87	12.62
TraesCS2B01G624100.1	Wheat	cytosol	13.79	10.7
TraesCS2B01G426000.1	Wheat	cytosol	5.32	10.16

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913
GO:GO:0008150	GO:GO:0008536	GO:GO:0008565	InterPro:HEAT_type_2	InterPro:IPR001494	InterPro:IPR011989
InterPro:IPR021133	InterPro:Importin-beta_N	InterPro:KPNB1_plant	PFAM:PF03810	PFscan:PS50077	PFscan:PS50166
PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS2B01G362200	EnsemblPlants:TraesCS2B01G362200.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:515048445..515051366

Molecular Weight (calculated)

77148.6 Da

IEP (calculated)

4.227

GRAVY (calculated)

-0.118

Length

696 amino acids

Sequence
(BLAST)

001: MGVLSSEALD MDQSIDILLA NACQGDDNLR SVAEGKLKQL HDLDLSNFLL GLSSQLLREE TPEESSILAG IILKNSLDSG EPALDDLGSR KWLSLDPSIQ
101: SQIKENLLLT LESNCDSRRR SSKIIAKVIA WVACIEIPRN QWEELIGKLV GNMSMPSSSL KQATLEVLEY VFEESPYVLK EDQVDAVLAS VINEVKMEEG
201: GEPSSQVRLA ALKALLNILK FIELAKLEEE SGSSSIVAAV CDGASRSKET KIKEAAFECL VVVASRYHTK LLPHMEIIVS LTVEALKVKE DEESLRVQCI
301: ELWNTICRKE INCREEEEEE DEEEDEEEEE EEGGGGGGGG DSIFIGHLCS FVQPLLEAYM EKEKNLEKEK KEQEVVSMSV EEEGEEEGDD NLEDMDISVS
401: AEQEGVNLDD IWEQVEDESV QDIFMTCLGL ATRTMKDKVV PLVMKFVHEN INGPSRMMAI YPLGFILEGP SVNQLAPVVP LLVRMMEDPQ EGEGVRGRAA
501: WILGRVFELV GANRIIKNEV VDFPRIMTLL IKMSKDVPQV SIEVYGAIYF LARGYREDAK STSKSSELTP FVKPLIDALL SASELVKETP FRIPPCASTY
601: KALSEIVRVS NIEELEICDA LIGLMSQIFR RLSTVVKGHG EAMSSDERKN RGLLEVLHCG LLELSMKQLG TSNFEVEAAF TLRDSASCLL LLCAVS

Best Arabidopsis Sequence Match ( AT3G08947.2 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RSVPCGLKI

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.