Factsheet for TraesCS2D01G341200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G362200.1	Wheat	cytosol	74.55	95.55
TraesCS2D01G434400.1	Wheat	cytosol	32.06	57.78
TraesCS2D01G480800.1	Wheat	cytosol	58.07	57.49
TraesCS2D01G480100.1	Wheat	cytosol	58.86	56.45
TraesCS5D01G022500.1	Wheat	cytosol	36.77	46.2
TraesCS5D01G042900.2	Wheat	cytosol	43.16	45.67
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	40.81	41.94
TraesCS5D01G057000.1	Wheat	cytosol	41.48	41.71
TraesCS1D01G224400.2	Wheat	golgi	40.02	41.13
EES19347	Sorghum	cytosol	39.69	40.69
Zm00001d038021_P001	Maize	plastid	40.02	40.61
Zm00001d010512_P001	Maize	plastid	39.57	40.3
TraesCS1D01G066600.1	Wheat	cytosol	38.68	39.29
TraesCS3D01G318400.1	Wheat	cytosol, peroxisome, plastid	28.48	38.96
EES13277	Sorghum	cytosol	31.84	38.74
Bra029733.1-P	Field mustard	cytosol	35.31	36.12
CDY44668	Canola	cytosol	35.31	36.08
CDY53085	Canola	cytosol	35.2	35.97
TraesCS4D01G193700.1	Wheat	endoplasmic reticulum	35.2	35.6
VIT_08s0058g00270.t01	Wine grape	cytosol	34.53	35.32
PGSC0003DMT400068505	Potato	cytosol	34.19	34.94
TraesCS5D01G094600.1	Wheat	cytosol	34.08	34.86
TraesCS5D01G095100.1	Wheat	golgi	33.41	34.17
AT3G08947.1	Thale cress	cytosol	24.66	33.49
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	34.42	30.67
CDY28068	Canola	cytosol	14.35	26.45
Bra029635.1-P	Field mustard	cytosol	5.38	19.43
TraesCS2D01G572700.1	Wheat	cytosol	13.45	13.38

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913
GO:GO:0008150	GO:GO:0008536	GO:GO:0008565	InterPro:HEAT_type_2	InterPro:IPR001494	InterPro:IPR011989
InterPro:IPR021133	InterPro:Importin-beta_N	InterPro:KPNB1_plant	PFAM:PF03810	PFscan:PS50077	PFscan:PS50166
PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913	SUPFAM:SSF48371	EnsemblPlantsGene:TraesCS2D01G341200	EnsemblPlants:TraesCS2D01G341200.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:435925149..435927923

Molecular Weight (calculated)

99017.7 Da

IEP (calculated)

4.502

GRAVY (calculated)

-0.072

Length

892 amino acids

Sequence
(BLAST)

001: MDQSIDILLA NACQGDDNLR SIAEGKLKQL HDLDLSNFLL GLSSQLSREE TPEESSILAG IILKNSLDSG EPALDDLGSR KWLSLDPSIQ SQIKENLLLT
101: LESNCDSRRR SSKIIAKVIA WVACIEIPRN QWEELIGKLV GNMSMPSSSL KQATLEVLEY VFEEIPYVLK EDQVDAVLAS VINEVKMEEG GEPSSQVRLA
201: ALKALLNILK FIELAKLEEE SGSSSIVAAV CDGASRSKET KIKEAAFECL VVVASRYHTK LLPHMEIIVS LTVEALKVKE DEESLRVQCI ELWNTICRKE
301: INCREEEEEE EEEDEEGGGG GGGDSIFIGH LCSFVQPLLE AYLEKEKNLE KEKKEQEVIS MSVEEEGEEE GDDNLEDMDI SVSAEQEGVN LDDIWEQVED
401: ESVQDIFMTC LGLATRTMKD KVVPLVMKFV HENINGPSRM MAIYPLGFIL EGPSVNQLAP VVPLLVRMME DPQEGEGVRG RAAWILGRVF ELVGANRIIK
501: NEVVDFPRIM TLLIKMSKDV PQVSIEVYGA IYFIARGYRE DAKSTSKSSE LTPFVKPLID ALLSASELVK ETPFRIPPCA STYKALSEIV RVSNIEELEI
601: SDALIGLMSQ IFRRLSTVVK GHGEAMSSDE RKNCGLLEVL HCGLLELSMK QLGRSNFEVE AAFTLRDSAS CLLLLLCRVL TSDNPTARAR AALAIGALAH
701: AIGCHFGQHM PILLQYFNVK RLSPVYIGVM CSICHILGKE EEVVPSWDHI MEVLYKGIQE LSLQPSILSS FGEIAVAIGD KFEKYVPPVL EKLREAEAAH
801: LKLGDEDHGS KVRESIFKAY HGMMEGINDP KCGMKVGMAL YEFIEDDQSN TKRRDTSVAM AGVDALSLLP MRVGAWSERL IVLMKEGFIS RQ

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.