Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G034200.1 | Wheat | cytosol | 93.24 | 94.81 |
| TraesCS5D01G022500.1 | Wheat | cytosol | 70.46 | 83.66 |
| TraesCS5D01G057000.1 | Wheat | cytosol | 85.88 | 81.62 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 50.77 | 49.31 |
| TraesCS1D01G224400.2 | Wheat | golgi | 50.18 | 48.73 |
| Zm00001d038021_P001 | Maize | plastid | 48.75 | 46.76 |
| Zm00001d010512_P001 | Maize | plastid | 48.52 | 46.69 |
| EES19347 | Sorghum | cytosol | 48.04 | 46.55 |
| TraesCS1D01G066600.1 | Wheat | cytosol | 48.28 | 46.36 |
| TraesCS3D01G318400.1 | Wheat | cytosol, peroxisome, plastid | 35.35 | 45.71 |
| EES13277 | Sorghum | cytosol | 38.43 | 44.2 |
| TraesCS2D01G341200.1 | Wheat | cytosol | 45.67 | 43.16 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 43.65 | 42.2 |
| CDY53085 | Canola | cytosol | 43.3 | 41.81 |
| Bra029733.1-P | Field mustard | cytosol | 43.06 | 41.63 |
| CDY44668 | Canola | cytosol | 43.06 | 41.58 |
| PGSC0003DMT400068505 | Potato | cytosol | 42.94 | 41.47 |
| TraesCS2D01G434400.1 | Wheat | cytosol | 23.61 | 40.2 |
| TraesCS2D01G480800.1 | Wheat | cytosol | 42.59 | 39.84 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 41.64 | 39.8 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 40.21 | 38.88 |
| AT3G08947.1 | Thale cress | cytosol | 30.01 | 38.51 |
| TraesCS2D01G480100.1 | Wheat | cytosol | 42.47 | 38.49 |
| TraesCS5D01G095100.1 | Wheat | golgi | 39.5 | 38.19 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 43.18 | 36.36 |
| CDY28068 | Canola | cytosol | 16.61 | 28.93 |
| Bra029635.1-P | Field mustard | cytosol | 6.88 | 23.48 |
| TraesCS2D01G572700.1 | Wheat | cytosol | 16.01 | 15.05 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant |
| PFAM:PF03810 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 |
| EnsemblPlantsGene:TraesCS5D01G042900 | EnsemblPlants:TraesCS5D01G042900.2 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:+:42555291..42560999
Molecular Weight (calculated)
93369.1 Da
IEP (calculated)
5.512
GRAVY (calculated)
-0.006
Length
843 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNITPILKD AQDPDNNIRL AAEGKLKQLQ ERNRSNFLLS LSAELSSEAS PPECRCLAGI ILKNSLEGKY SEDNSLLIKQ WNNLDPCIKS QIKESLLITL
101: GSSAPQARHA SSQIIGRLAY IETPSERWQD LIGRLLGNMA QQGASPTLKQ ATLEALEYVF EEENLWFDKD TINGVLDAVI RAMNHQAEKS SEVRLAAVKA
201: LRNVLTFANF ANDDDCRNRI MTAICDAAKH DEAAEIKHAA FVCLTAIASN YIMELEPYME TTLSRTTEAL GLEGGVETVA LECIEFWSTI CGEVIELRER
301: KKRFAHAIPS ADCHFTEKPL CLLVPLLLQT LSLHQERDVD ELNIFMSAVA CLGLVARTIG DAVVPLAMQF VEGNIKVADW RSRKTAISVL GVMLEGPSIE
401: KLAPVVGLLM DRMEDPHMEV RGTAACTLGR VLELRHSPAL DKRFFTNEDF PRIMAALSKS GKDVPEVSKE VCGAIYFLAR GYDVAISSEV DHSKKRISSE
501: LSPFLGGVID ALLSASELDM KTPFGLPASA SAYGALIEVV RVSNIWDLKA VLAIIVLMPR IMRRLNTVLD AKAISSDDKT NKHDLQALLC DVLHAIIEKL
601: GNSLHGDKVR ESAPFMLLQF CRVLTCDCST ARDKAALTIG ALARAVGPKF LDFMPIFLQY YSVKLFSPIY LEAIGTIFHA LGDEILPCCD HMMDVLYEGL
701: SQPELKPQIL ACFGEIALAI GKIFEEKYLQ AVRKELKEAA NPRYYDEDKV DYGNQLRQGI CKAYSGILRG IKDRKSGLKV AADLVEFIEA VSEDKSRGTS
801: VTYAAVDVLD QFGFTAESWK EGLISELWRH VCCRCSKLDK LHR
101: GSSAPQARHA SSQIIGRLAY IETPSERWQD LIGRLLGNMA QQGASPTLKQ ATLEALEYVF EEENLWFDKD TINGVLDAVI RAMNHQAEKS SEVRLAAVKA
201: LRNVLTFANF ANDDDCRNRI MTAICDAAKH DEAAEIKHAA FVCLTAIASN YIMELEPYME TTLSRTTEAL GLEGGVETVA LECIEFWSTI CGEVIELRER
301: KKRFAHAIPS ADCHFTEKPL CLLVPLLLQT LSLHQERDVD ELNIFMSAVA CLGLVARTIG DAVVPLAMQF VEGNIKVADW RSRKTAISVL GVMLEGPSIE
401: KLAPVVGLLM DRMEDPHMEV RGTAACTLGR VLELRHSPAL DKRFFTNEDF PRIMAALSKS GKDVPEVSKE VCGAIYFLAR GYDVAISSEV DHSKKRISSE
501: LSPFLGGVID ALLSASELDM KTPFGLPASA SAYGALIEVV RVSNIWDLKA VLAIIVLMPR IMRRLNTVLD AKAISSDDKT NKHDLQALLC DVLHAIIEKL
601: GNSLHGDKVR ESAPFMLLQF CRVLTCDCST ARDKAALTIG ALARAVGPKF LDFMPIFLQY YSVKLFSPIY LEAIGTIFHA LGDEILPCCD HMMDVLYEGL
701: SQPELKPQIL ACFGEIALAI GKIFEEKYLQ AVRKELKEAA NPRYYDEDKV DYGNQLRQGI CKAYSGILRG IKDRKSGLKV AADLVEFIEA VSEDKSRGTS
801: VTYAAVDVLD QFGFTAESWK EGLISELWRH VCCRCSKLDK LHR
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.