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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY28068 Canola cytosol 80.16 40.91
TraesCS1A01G065000.1 Wheat cytosol 17.41 12.68
AT3G08947.1 Thale cress cytosol 29.55 11.11
EES13277 Sorghum cytosol 27.53 9.28
Bra029733.1-P Field mustard cytosol 31.58 8.94
VIT_08s0058g00270.t01 Wine grape cytosol 31.58 8.94
GSMUA_Achr8P01910_001 Banana cytosol 28.74 8.84
TraesCS3D01G318400.1 Wheat cytosol, peroxisome, plastid 23.08 8.74
Os03t0294600-01 Rice cytosol 12.96 8.63
GSMUA_Achr5P28110_001 Banana cytosol 29.15 8.56
TraesCS1D01G224400.2 Wheat golgi 29.15 8.29
TraesCS1A01G222800.2 Wheat golgi, unclear 29.15 8.29
TraesCS1B01G236100.3 Wheat cytosol 29.15 8.28
HORVU1Hr1G060180.2 Barley cytosol 28.74 8.18
Os05t0353400-01 Rice cytosol, plasma membrane, plastid 28.34 8.06
Bra003054.1-P Field mustard cytosol 28.34 8.06
EES19347 Sorghum cytosol 28.34 8.05
PGSC0003DMT400068505 Potato cytosol 28.34 8.02
Zm00001d038021_P001 Maize plastid 27.94 7.85
Zm00001d010512_P001 Maize plastid 27.53 7.76
TraesCS4D01G193700.1 Wheat endoplasmic reticulum 27.53 7.71
GSMUA_Achr10P... Banana cytosol 25.91 7.61
TraesCS4B01G192500.1 Wheat endoplasmic reticulum 27.13 7.6
TraesCS4A01G111400.1 Wheat endoplasmic reticulum 27.13 7.6
TraesCS1B01G083800.1 Wheat cytosol 26.72 7.59
TraesCS1D01G066600.1 Wheat cytosol 25.51 7.18
TraesCS1A01G065600.1 Wheat cytosol 25.1 7.13
HORVU4Hr1G055910.2 Barley cytosol, plastid 27.53 7.03
Solyc09g005010.2.1 Tomato endoplasmic reticulum 28.34 6.99
TraesCS5D01G042900.2 Wheat cytosol 23.48 6.88
TraesCS7B01G222000.1 Wheat cytosol 23.08 6.88
HORVU1Hr1G013580.2 Barley cytosol, plastid 26.32 6.74
TraesCS5D01G057000.1 Wheat cytosol 23.89 6.65
TraesCS5B01G051300.1 Wheat cytosol 23.89 6.65
TraesCS5B01G034200.1 Wheat cytosol 22.27 6.63
TraesCS2A01G435400.1 Wheat cytosol 19.84 6.14
TraesCS2D01G480100.1 Wheat cytosol 22.27 5.91
TraesCS2B01G505600.1 Wheat cytosol 22.27 5.88
TraesCS2D01G480800.1 Wheat cytosol 21.05 5.77
TraesCS2B01G506500.1 Wheat cytosol 21.05 5.75
TraesCS3A01G325000.1 Wheat cytosol 11.74 5.58
TraesCS2D01G341200.1 Wheat cytosol 19.43 5.38
TraesCS2B01G362200.1 Wheat cytosol 14.98 5.32
TraesCS5D01G022500.1 Wheat cytosol 14.57 5.07
TraesCS2D01G434400.1 Wheat cytosol 9.72 4.85
Bra010184.1-P Field mustard cytosol, mitochondrion 5.67 4.59
Bra037286.1-P Field mustard cytosol 14.57 4.02
Bra013038.1-P Field mustard cytosol 12.96 3.63
Bra002011.1-P Field mustard cytosol 12.96 3.63
Protein Annotations
Gene3D:1.25.10.10Gene3D:3.40.525.10MapMan:35.1InterPro:ARM-likeInterPro:ARM-type_foldEnsemblPlantsGene:Bra029635
EnsemblPlants:Bra029635.1EnsemblPlants:Bra029635.1-PInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_domInterPro:CRAL/TRIO_N_dom_sfncoils:Coil
GO:GO:0003674GO:GO:0005488InterPro:IPR011989InterPro:IPR036865UniProt:M4ELG7PFAM:PF03765
PANTHER:PTHR23324PANTHER:PTHR23324:SF96SMART:SM01100SUPFAM:SSF46938SUPFAM:SSF48371UniParc:UPI0002547FB2
Description
AT1G72160 (E=3e-024) | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Coordinates
chrA05:+:22876960..22877791
Molecular Weight (calculated)
28320.5 Da
IEP (calculated)
9.345
GRAVY (calculated)
-0.302
Length
247 amino acids
Sequence
(BLAST)
001: MRISMAARKY ICLVSRMSGD EIVHIAIPFI RENILEIGSW RHREAAISAY ESILDGSTIN KLSPHVTGLL RFLLPTIKDE NNVPETMEGF QKHQRVTGSD
101: NTVSASQQPK VIEKLTVSKK KSLIELMPLV RGNLNSNGEL EKEMWKIFLL EEEKSQVILM KFLSAKDFSV KKSLKMLKNT LKWRTTMRIK ELCQGQSVVD
201: HPTSIFIYGH DREGHAVVYD NVYNDFPKKI FDDRTELDCT VSSFLKT
Best Arabidopsis Sequence Match ( AT1G72160.1 )
(BLAST)
001: MAEEPTTTTL VTPEKLPSPS LTPSEVSEST QDALPTETET LEKVTETNPP ETADTTTKPE EETAAEHHPP TVTETETAST EKQEVKDEAS QKEVAEEKKS
101: MIPQNLGSFK EESSKLSDLS NSEKKSLDEL KHLVREALDN HQFTNTPEEV KIWGIPLLED DRSDVVLLKF LRAREFKVKD SFAMLKNTIK WRKEFKIDEL
201: VEEDLVDDLD KVVFMHGHDR EGHPVCYNVY GEFQNKELYN KTFSDEEKRK HFLRTRIQFL ERSIRKLDFS SGGVSTIFQV NDMKNSPGLG KKELRSATKQ
301: AVELLQDNYP EFVFKQAFIN VPWWYLVFYT VIGPFMTPRS KSKLVFAGPS RSAETLFKYI SPEQVPVQYG GLSVDPCDCN PDFSLEDSAS EITVKPGTKQ
401: TVEIIIYEKC ELVWEIRVTG WEVSYKAEFV PEEKDAYTVV IQKPRKMRPS DEPVLTHSFK VNELGKVLLT VDNPTSKKKK LVYRFNVKPL
Arabidopsis Description
PATL3Patellin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56Z59]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.