Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G111400.1 | Wheat | endoplasmic reticulum | 87.9 | 96.37 |
| TraesCS4B01G192500.1 | Wheat | endoplasmic reticulum | 87.8 | 96.26 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 87.69 | 96.15 |
| Os03t0294600-01 | Rice | cytosol | 32.78 | 85.44 |
| GSMUA_Achr5P28110_001 | Banana | cytosol | 62.67 | 72.06 |
| GSMUA_Achr8P01910_001 | Banana | cytosol | 58.74 | 70.73 |
| GSMUA_Achr10P... | Banana | cytosol | 60.81 | 69.92 |
| HORVU1Hr1G060180.2 | Barley | cytosol | 60.29 | 67.17 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 60.08 | 66.63 |
| PGSC0003DMT400068505 | Potato | cytosol | 58.43 | 64.72 |
| AT3G08947.1 | Thale cress | cytosol | 43.23 | 63.62 |
| Bra029733.1-P | Field mustard | cytosol | 56.77 | 62.96 |
| CDY44668 | Canola | cytosol | 56.77 | 62.89 |
| CDY53085 | Canola | cytosol | 56.67 | 62.77 |
| HORVU1Hr1G013580.2 | Barley | cytosol, plastid | 59.98 | 60.17 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 59.36 | 57.34 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 51.5 | 57.11 |
| HORVU5Hr1G021530.2 | Barley | cytosol | 51.19 | 56.31 |
| CDY28068 | Canola | cytosol | 17.17 | 34.3 |
| Bra029635.1-P | Field mustard | cytosol | 7.03 | 27.53 |
| HORVU2Hr1G126610.7 | Barley | cytosol | 18.1 | 19.8 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | UniProt:A0A287P586 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 |
| GO:GO:0008565 | EnsemblPlantsGene:HORVU4Hr1G055910 | EnsemblPlants:HORVU4Hr1G055910.2 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
| InterPro:KPNB1_plant | PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 |
| SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI000B4649E3 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr4H:-:470254847..470259530
Molecular Weight (calculated)
105778.0 Da
IEP (calculated)
4.499
GRAVY (calculated)
-0.050
Length
967 amino acids
Sequence
(BLAST)
(BLAST)
001: ALRSLASLFL PSVSTNRSTP LPIVSLPHEF KFLSSPKTPP PLPAQPPSPS PSPSEIPTDL PIPGSEPAPD RRREVARGQG AAEDPVGEQR RSPSKVKLMD
101: ITEVLLATQS HDGQIRNAAE GNIKQFEEQS FPQFLQALSA ELSNDNKPPV SRRLAGILLK NSLDANDLAR KEKCAQRWIS VDPAIKSQVK GSLLMTLGSP
201: VSDAHRSSSQ VIAKIASIEI PLQGWPELIV SLLGNMTKQD APPSLKQATL DAIGYVCEEV SPKDLEQDQV NAVLTAVVQG MNHMENSSGV RLAAVKALYN
301: ALDFAETNFQ NESERNYIMK VVCETAISKE ADIRKAAFEC LVSIASTYYD LLEPYMQTLF ELTANAARAD EEQVALQAIE FWSTICDEEV AIQEDAEESG
401: DVSSACYFHF IEKALPLLVP MLLETLLKQE EDQDEDDGIW NISMAGGTCL GLVATAVKDA IVPLVMPFIE GNITKPDWHS REAATFAFGS ILEGPSVEKL
501: APLVQAGFDF LLNATKDQNN HVRETTAWAL SRTFEFLHAP TSGVSVVTNA NLPHVLEIML TSIKDSPNVA EKICGALYFL AHGYENAGSM SSVLSPYFGQ
601: LVSALLATAD RSDSNNSRLC ASAYETLNEI VRCSSIADTL NMIVLLLQEI LKRLNQTFEF QIASSEDKEK QSDLQALLCG VVQVILQKFS NCDDKSVIIQ
701: FADEIMVLFL RVFSCDSSNV HEEAMLAIGA LAYATGPEFV KYMPEFHKYL EMGLQNFGAY QVCCVSVGVV ADICRALDEK VLPYCDGIMS ALLKDLSSPE
801: LHRSVKPPIM SCIGDIALTI GEHFEKYVPY TVPMLQGAAE LCSRMDLPDD DSTEYKNELR RSIFEAYSGI LQGVKSSKSE LMVPYAGHIF QFAELVLRET
901: SRDEGLTKAG VALVGDLADA LGPSIKLLLK NSNFHSELLG RCSQSDDEQL RETASWVQGV ISRVLVS
101: ITEVLLATQS HDGQIRNAAE GNIKQFEEQS FPQFLQALSA ELSNDNKPPV SRRLAGILLK NSLDANDLAR KEKCAQRWIS VDPAIKSQVK GSLLMTLGSP
201: VSDAHRSSSQ VIAKIASIEI PLQGWPELIV SLLGNMTKQD APPSLKQATL DAIGYVCEEV SPKDLEQDQV NAVLTAVVQG MNHMENSSGV RLAAVKALYN
301: ALDFAETNFQ NESERNYIMK VVCETAISKE ADIRKAAFEC LVSIASTYYD LLEPYMQTLF ELTANAARAD EEQVALQAIE FWSTICDEEV AIQEDAEESG
401: DVSSACYFHF IEKALPLLVP MLLETLLKQE EDQDEDDGIW NISMAGGTCL GLVATAVKDA IVPLVMPFIE GNITKPDWHS REAATFAFGS ILEGPSVEKL
501: APLVQAGFDF LLNATKDQNN HVRETTAWAL SRTFEFLHAP TSGVSVVTNA NLPHVLEIML TSIKDSPNVA EKICGALYFL AHGYENAGSM SSVLSPYFGQ
601: LVSALLATAD RSDSNNSRLC ASAYETLNEI VRCSSIADTL NMIVLLLQEI LKRLNQTFEF QIASSEDKEK QSDLQALLCG VVQVILQKFS NCDDKSVIIQ
701: FADEIMVLFL RVFSCDSSNV HEEAMLAIGA LAYATGPEFV KYMPEFHKYL EMGLQNFGAY QVCCVSVGVV ADICRALDEK VLPYCDGIMS ALLKDLSSPE
801: LHRSVKPPIM SCIGDIALTI GEHFEKYVPY TVPMLQGAAE LCSRMDLPDD DSTEYKNELR RSIFEAYSGI LQGVKSSKSE LMVPYAGHIF QFAELVLRET
901: SRDEGLTKAG VALVGDLADA LGPSIKLLLK NSNFHSELLG RCSQSDDEQL RETASWVQGV ISRVLVS
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.