Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P01910_001 | Banana | cytosol | 84.3 | 88.29 |
| GSMUA_Achr10P... | Banana | cytosol | 87.16 | 87.16 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 74.08 | 71.44 |
| Os03t0294600-01 | Rice | cytosol | 30.92 | 70.08 |
| TraesCS4B01G192500.1 | Wheat | endoplasmic reticulum | 72.06 | 68.71 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 71.94 | 68.59 |
| TraesCS4A01G111400.1 | Wheat | endoplasmic reticulum | 71.7 | 68.37 |
| PGSC0003DMT400068505 | Potato | cytosol | 70.63 | 68.04 |
| Bra029733.1-P | Field mustard | cytosol | 67.42 | 65.02 |
| CDY44668 | Canola | cytosol | 67.42 | 64.95 |
| CDY53085 | Canola | cytosol | 67.18 | 64.72 |
| AT3G08947.1 | Thale cress | cytosol | 49.94 | 63.93 |
| HORVU4Hr1G055910.2 | Barley | cytosol, plastid | 72.06 | 62.67 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 61.71 | 61.79 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 58.62 | 61.55 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 70.87 | 59.54 |
| GSMUA_Achr5P09570_001 | Banana | cytosol | 16.88 | 58.68 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 21.88 | 49.2 |
| CDY28068 | Canola | cytosol | 20.33 | 35.33 |
| Bra029635.1-P | Field mustard | cytosol | 8.56 | 29.15 |
| GSMUA_Achr4P16350_001 | Banana | cytosol | 7.49 | 20.32 |
| GSMUA_Achr8P34170_001 | Banana | cytosol | 19.74 | 18.63 |
| GSMUA_Achr4P16360_001 | Banana | cytosol | 10.11 | 16.13 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 |
| EnsemblPlantsGene:GSMUA_Achr5G28110_001 | EnsemblPlants:GSMUA_Achr5P28110_001 | EnsemblPlants:GSMUA_Achr5T28110_001 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
| InterPro:KPNB1_plant | UniProt:M0T2D5 | PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 |
| PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI00029597CA | SEG:seg | : |
Description
Putative Importin subunit beta-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G28110_001]
Coordinates
chr5:-:28450665..28453361
Molecular Weight (calculated)
93207.9 Da
IEP (calculated)
4.434
GRAVY (calculated)
-0.033
Length
841 amino acids
Sequence
(BLAST)
(BLAST)
001: MEITQILLSA QSPDGQIRTL AEANLKQFQE QSLPHFLVSL SVELSSEQKP PESRRLAGII LKNSLDAKDT VRKEELIQRW VSVDPSIKAQ IKESLLRTLG
101: STVSEARHTS SQVIAKVASI EIPRHEWQEL IGQLLNNMTR LDAPAPLKQA TLEALGYVCE EVSPQDLEQA QVNSVLTAVV QGMNQAEHSS EVRLAAVKAL
201: YNALDFAQTN FDNEVERNFI MKVICETALS KELEIRQAAF ECLVSIASTY YEFLEPYMQT LFDLTANAVR GDEEPVALQA IEFWKKALPL LVPLMLETLL
301: KQEEDQDQDD GVWNLSMAGG TCLGLVARTV GDAIVSLVMP FVENNITKGE WRSREAATFA FGSILEGPST EKLAPLVQAG LDFLLNAMKD QNSHVKDTTA
401: WTLGRIFEIL HSGTSEYPVL TTTNLPRIMS VLLVSIRDSP NVAEKVCGAI YFLAQGFEDA DSNSSMLTPY LGDVVSALLS TADRADTSNV RLRSSAYETL
501: NEIIRCSGTP ETSNMIAHLL LEIMNRLSKT LELQIASSED REKQSDVQAL LCGVLQVILQ KLSNSDETKS IILQSADQMM TLFLQVFACR SSTVHEEAML
601: AIGALAYGTG PEFATYMQEF YKYLEMGLQN FEEYQVCSIS VGVVGDICRA LDDKVLPYCD GIMSQLLKDL SNPVLHRSVK PPIFSCFGDI ALAIGEHFEK
701: YVPYVMPMLQ GAAELCSQLD INDDDMQEYG NQLRRGIFEA YSGILQGFKR STAAVMVPYA SPLLKFIEAV VRDKNRDEEV TKAAVAVIGD LADTLGPDTK
801: VLFKDCTFHM DLLGECFQSD NEQLKETATW TKGMIYRVLV S
101: STVSEARHTS SQVIAKVASI EIPRHEWQEL IGQLLNNMTR LDAPAPLKQA TLEALGYVCE EVSPQDLEQA QVNSVLTAVV QGMNQAEHSS EVRLAAVKAL
201: YNALDFAQTN FDNEVERNFI MKVICETALS KELEIRQAAF ECLVSIASTY YEFLEPYMQT LFDLTANAVR GDEEPVALQA IEFWKKALPL LVPLMLETLL
301: KQEEDQDQDD GVWNLSMAGG TCLGLVARTV GDAIVSLVMP FVENNITKGE WRSREAATFA FGSILEGPST EKLAPLVQAG LDFLLNAMKD QNSHVKDTTA
401: WTLGRIFEIL HSGTSEYPVL TTTNLPRIMS VLLVSIRDSP NVAEKVCGAI YFLAQGFEDA DSNSSMLTPY LGDVVSALLS TADRADTSNV RLRSSAYETL
501: NEIIRCSGTP ETSNMIAHLL LEIMNRLSKT LELQIASSED REKQSDVQAL LCGVLQVILQ KLSNSDETKS IILQSADQMM TLFLQVFACR SSTVHEEAML
601: AIGALAYGTG PEFATYMQEF YKYLEMGLQN FEEYQVCSIS VGVVGDICRA LDDKVLPYCD GIMSQLLKDL SNPVLHRSVK PPIFSCFGDI ALAIGEHFEK
701: YVPYVMPMLQ GAAELCSQLD INDDDMQEYG NQLRRGIFEA YSGILQGFKR STAAVMVPYA SPLLKFIEAV VRDKNRDEEV TKAAVAVIGD LADTLGPDTK
801: VLFKDCTFHM DLLGECFQSD NEQLKETATW TKGMIYRVLV S
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.