Factsheet for Os03t0294600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G111400.1	Wheat	endoplasmic reticulum	85.98	36.17
TraesCS4B01G192500.1	Wheat	endoplasmic reticulum	85.98	36.17
TraesCS4D01G193700.1	Wheat	endoplasmic reticulum	85.71	36.05
AT3G08947.1	Thale cress	cytosol	59.57	33.64
HORVU4Hr1G055910.2	Barley	cytosol, plastid	85.44	32.78
GSMUA_Achr8P01910_001	Banana	cytosol	70.62	32.63
GSMUA_Achr5P28110_001	Banana	cytosol	70.08	30.92
GSMUA_Achr10P...	Banana	cytosol	69.54	30.68
Os12t0568800-01	Rice	plasma membrane	53.37	28.16
VIT_08s0058g00270.t01	Wine grape	cytosol	65.5	27.87
PGSC0003DMT400068505	Potato	cytosol	65.5	27.84
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	64.96	27.77
Bra029733.1-P	Field mustard	cytosol	60.38	25.69
CDY44668	Canola	cytosol	60.38	25.66
CDY53085	Canola	cytosol	59.84	25.43
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	65.23	24.18
Bra029635.1-P	Field mustard	cytosol	8.63	12.96
CDY28068	Canola	cytosol	7.01	5.37
Os04t0691500-01	Rice	cytosol, plasma membrane	10.78	5.21
Os04t0691600-02	Rice	plastid	0.81	2.07

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold	ProteinID:BAF11732.1	ProteinID:BAS83700.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0006913	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	InterPro:IPR011989
InterPro:KPNB1_plant	EnsemblPlantsGene:Os03g0294600	EnsemblPlants:Os03t0294600-01	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	UniProt:Q0DSQ6
SUPFAM:SSF48371	UniParc:UPI0000E12023	:	:	:	:

Description

Similar to Importin-beta1. (Os03t0294600-01)

Coordinates

chr3:-:10279758..10281523

Molecular Weight (calculated)

41170.6 Da

IEP (calculated)

4.594

GRAVY (calculated)

0.060

Length

371 amino acids

Sequence
(BLAST)

001: LGEIISALLA TADRSDSNNS RLCASAYETL NEIVRCSHIS ENLNMIVQLL QEILKRLNQT FEIQITSSDD KEKQSDLQAL LCGVAQVILQ KFSSCHEKSA
101: ILHFADQMMV LFLRVFSCNS SNVHEEAMLA IGALAYATGP EFVKYMPEFH KYLEMGLQNF GAYQVCCVSV GVVGDICHAL DDKVLPYCDG IMSTLLKDLS
201: SPELHRSVKP PILSCIGDIA LTMGEHFEKY VPYTMPMLQG AAELCFRMDA PDDDSIEYQN ELSRSIFEAY SGILQGFKNS KSELMVPYAG NIFQFVELVL
301: KDNLLRNESV TKAGVAMVGD LADALGPNIK LLFKDSKFHS ELLGQCCQSD DEQLRETASW VQGVITRVLV S

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.