Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 88.42 | 84.42 |
| GSMUA_Achr5P28110_001 | Banana | cytosol | 88.29 | 84.3 |
| Os03t0294600-01 | Rice | cytosol | 32.63 | 70.62 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 74.72 | 68.81 |
| PGSC0003DMT400068505 | Potato | cytosol | 70.73 | 65.06 |
| TraesCS4B01G192500.1 | Wheat | endoplasmic reticulum | 71.23 | 64.85 |
| TraesCS4A01G111400.1 | Wheat | endoplasmic reticulum | 70.98 | 64.63 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 70.86 | 64.51 |
| Bra029733.1-P | Field mustard | cytosol | 68.24 | 62.84 |
| CDY44668 | Canola | cytosol | 68.24 | 62.77 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 62.52 | 62.67 |
| CDY53085 | Canola | cytosol | 68.12 | 62.66 |
| AT3G08947.1 | Thale cress | cytosol | 49.32 | 60.27 |
| HORVU4Hr1G055910.2 | Barley | cytosol, plastid | 70.73 | 58.74 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 61.39 | 58.69 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 70.86 | 56.84 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 23.41 | 50.27 |
| GSMUA_Achr5P09570_001 | Banana | cytosol | 13.7 | 45.45 |
| CDY28068 | Canola | cytosol | 19.05 | 31.61 |
| Bra029635.1-P | Field mustard | cytosol | 8.84 | 28.74 |
| GSMUA_Achr8P34170_001 | Banana | cytosol | 19.05 | 17.17 |
| GSMUA_Achr4P16360_001 | Banana | cytosol | 10.96 | 16.7 |
| GSMUA_Achr4P16350_001 | Banana | cytosol | 6.35 | 16.45 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 |
| EnsemblPlantsGene:GSMUA_Achr8G01910_001 | EnsemblPlants:GSMUA_Achr8P01910_001 | EnsemblPlants:GSMUA_Achr8T01910_001 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
| InterPro:KPNB1_plant | UniProt:M0TLU3 | PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 |
| PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI000294F61B | SEG:seg | : |
Description
Putative Importin subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr8G01910_001]
Coordinates
chr8:-:1425176..1428186
Molecular Weight (calculated)
88525.3 Da
IEP (calculated)
4.562
GRAVY (calculated)
-0.024
Length
803 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEITQVLL SAQSPDGHTR TLAEANLKQF QEQNLPLFLL SLSVELSSEQ KPPESRRLAG IILKNSLDAK DAVRKEELTQ RWVSVDPSIK SQIKDSLLRT
101: LGSSVSDARQ TSSQVIAKVA SIEVPRREWQ ELIGLLLNNM TQPDAPAPLK QSTLEALGYV CEEVSPQDLE QDQVNAILTA VVQGMNQTEH SSEVRLAAVK
201: ALYNALDFAQ TNFENEVERN FIMKVVCETT MSKESEIRQA AIECLVSIAS TYYEYLEPYM QTLFNLTANA EDGVWNLSMA GGTCLGLIAR TVGDAVVPLA
301: MPFVESNITK GDWRSREAAT FAFGSILEGP SIEKLAPLVH SGLQFLLNAM KDQNSHVKDT TAWTLGRIFE FLHSAGGEYP ILTATNLPHI MSVLLESIRD
401: APNVAEKVCG AIYFLAQGFE DAGSSSSILS PYLGDIVSAL LSTADRTDPS NVRLRSSAYE TLNEIVRCSS IPETSNMVAH LLHEIMNRLS KTLELHIASS
501: EDREKQGDLQ ALLCGVLQVI LQKLSNSNET KPIILQSADQ MMILFLQVFA CRSSTVHEEA MLAIGALAYA TGPEFAKYMQ EFYKYLEMGL QNFEEYQVCS
601: ISVGVVGDIC RAVDDKVLPY CDGIMSQLLK DLSSPMLHRS VKPPIFSCFG DIALAIGEHF EKYVPYVIPM LQGAAELCSH LDVNDDDMQE YGNQLRRGIF
701: EAYSGILQGF KGPKAALMVP CASPLLSFIE AVVRDTNRDE EVTKAAVAVL GDLADTLGPN TKILFKDCTF HMELLGECFR SDNDQLKETA TWTQGMIQRV
801: LVS
101: LGSSVSDARQ TSSQVIAKVA SIEVPRREWQ ELIGLLLNNM TQPDAPAPLK QSTLEALGYV CEEVSPQDLE QDQVNAILTA VVQGMNQTEH SSEVRLAAVK
201: ALYNALDFAQ TNFENEVERN FIMKVVCETT MSKESEIRQA AIECLVSIAS TYYEYLEPYM QTLFNLTANA EDGVWNLSMA GGTCLGLIAR TVGDAVVPLA
301: MPFVESNITK GDWRSREAAT FAFGSILEGP SIEKLAPLVH SGLQFLLNAM KDQNSHVKDT TAWTLGRIFE FLHSAGGEYP ILTATNLPHI MSVLLESIRD
401: APNVAEKVCG AIYFLAQGFE DAGSSSSILS PYLGDIVSAL LSTADRTDPS NVRLRSSAYE TLNEIVRCSS IPETSNMVAH LLHEIMNRLS KTLELHIASS
501: EDREKQGDLQ ALLCGVLQVI LQKLSNSNET KPIILQSADQ MMILFLQVFA CRSSTVHEEA MLAIGALAYA TGPEFAKYMQ EFYKYLEMGL QNFEEYQVCS
601: ISVGVVGDIC RAVDDKVLPY CDGIMSQLLK DLSSPMLHRS VKPPIFSCFG DIALAIGEHF EKYVPYVIPM LQGAAELCSH LDVNDDDMQE YGNQLRRGIF
701: EAYSGILQGF KGPKAALMVP CASPLLSFIE AVVRDTNRDE EVTKAAVAVL GDLADTLGPN TKILFKDCTF HMELLGECFR SDNDQLKETA TWTQGMIQRV
801: LVS
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.