Factsheet for GSMUA_Achr5P09580_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0568800-01	Rice	plasma membrane	68.18	36.27
GSMUA_Achr1P28070_001	Banana	cytosol	73.8	32.86
GSMUA_Achr3P25220_001	Banana	cytosol	69.52	32.46
Solyc06g052030.2.1	Tomato	plastid	67.11	32.06
PGSC0003DMT400047662	Potato	cytosol	68.45	29.39
PGSC0003DMT400050414	Potato	cytosol	67.38	29.03
TraesCS5D01G094600.1	Wheat	cytosol	67.38	28.9
TraesCS5B01G088700.1	Wheat	cytosol	67.38	28.9
TraesCS5A01G082600.1	Wheat	golgi	67.38	28.9
TraesCS5A01G077200.1	Wheat	golgi	67.38	28.9
HORVU5Hr1G021580.1	Barley	cytosol	67.38	28.9
EES16185	Sorghum	cytosol	67.11	28.78
TraesCS5D01G095100.1	Wheat	golgi	67.11	28.78
HORVU5Hr1G021530.2	Barley	cytosol	67.38	28.67
TraesCS5B01G088400.1	Wheat	cytosol	66.58	28.55
Bra003054.1-P	Field mustard	cytosol	65.51	28.23
CDY14379	Canola	cytosol	65.51	28.23
KRH41369	Soybean	cytosol, endoplasmic reticulum, nucleus	65.51	28.16
CDY35657	Canola	cytosol	65.24	28.11
KRH60084	Soybean	cytosol, endoplasmic reticulum, nucleus	64.71	27.82
AT5G53480.1	Thale cress	cytosol	64.44	27.7
Solyc03g082940.2.1	Tomato	plastid	68.45	26.83
VIT_16s0098g01630.t01	Wine grape	plastid	67.38	26.53
KRH53541	Soybean	cytosol	59.89	25.72
Zm00001d041556_P002	Maize	cytosol	66.58	25.23
Zm00001d030694_P002	Maize	mitochondrion	69.79	24.3
GSMUA_Achr8P01910_001	Banana	cytosol	50.27	23.41
GSMUA_Achr5P28110_001	Banana	cytosol	49.2	21.88
GSMUA_Achr10P...	Banana	cytosol	48.66	21.64
KRH64395	Soybean	peroxisome	41.98	20.21
GSMUA_Achr4P16360_001	Banana	cytosol	12.3	8.73
GSMUA_Achr8P34170_001	Banana	cytosol	14.71	6.17
GSMUA_Achr5P09570_001	Banana	cytosol	0.0	0.0
GSMUA_Achr4P16350_001	Banana	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006913
GO:GO:0008150	GO:GO:0008565	GO:GO:0015031	EnsemblPlantsGene:GSMUA_Achr5G09580_001	EnsemblPlants:GSMUA_Achr5P09580_001	EnsemblPlants:GSMUA_Achr5T09580_001
InterPro:IPR011989	InterPro:KPNB1_plant	UniProt:M0SX37	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SUPFAM:SSF48371
UniParc:UPI0002949261	:	:	:	:	:

Description

Putative Importin subunit beta-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G09580_001]

Coordinates

chr5:+:6845233..6850639

Molecular Weight (calculated)

41610.3 Da

IEP (calculated)

4.999

GRAVY (calculated)

-0.040

Length

374 amino acids

Sequence
(BLAST)

001: MMEFHQMLEA QKLSSDEREK QNELQGLLCG CLQVIIQKLG ASEATKHVLM QYADQIMELF LRVFACRNAT VHEEAMLAIC ALAYAVGGNF IKYMQSFYPY
101: LEMGLQNFQE YQVCAVTVGV VGDLCRALED KILPYCDGIM TQLLKDLSSN QLHRSVKPPI FSCLGDITLA IGENFEKYLI YAMPMLQSAA ELSAYAVATD
201: DEMLEYTNEL RNGILEAFSG ILQGFKSCPK TQLLMPHAPH ILQFLDRLYN GKDIDEVVMK TAVGVLGHLA DTLGAHAGTL IDQSAASKEF LGECLLSDDQ
301: FIRESADRAK LAISRLRKSS NHAKSQNLPH LSLADPSPCV FFLPSWKNSN WEGTCIPGGQ DEQQKGITGD YIRL

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.