Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g052030.2.1 | Tomato | plastid | 87.67 | 97.19 |
| PGSC0003DMT400047662 | Potato | cytosol | 91.82 | 91.5 |
| CDY35657 | Canola | cytosol | 86.29 | 86.29 |
| CDY14379 | Canola | cytosol | 86.18 | 86.18 |
| Bra003054.1-P | Field mustard | cytosol | 86.06 | 86.06 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 82.49 | 85.24 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 78.34 | 84.89 |
| AT5G53480.1 | Thale cress | cytosol | 84.68 | 84.48 |
| VIT_16s0098g01630.t01 | Wine grape | plastid | 91.94 | 84.0 |
| Os12t0568800-01 | Rice | plasma membrane | 67.97 | 83.93 |
| KRH53541 | Soybean | cytosol | 82.6 | 82.32 |
| TraesCS5A01G077200.1 | Wheat | golgi | 82.6 | 82.22 |
| TraesCS5A01G082600.1 | Wheat | golgi | 82.37 | 82.0 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 82.37 | 82.0 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 82.37 | 82.0 |
| TraesCS5D01G095100.1 | Wheat | golgi | 82.37 | 82.0 |
| EES16185 | Sorghum | cytosol | 82.37 | 82.0 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 82.26 | 81.88 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 82.03 | 81.65 |
| HORVU5Hr1G021530.2 | Barley | cytosol | 82.26 | 81.23 |
| KRH64395 | Soybean | peroxisome | 71.77 | 80.18 |
| GSMUA_Achr5P09570_001 | Banana | cytosol | 21.2 | 76.03 |
| Zm00001d041556_P002 | Maize | cytosol | 81.68 | 71.83 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 29.03 | 67.38 |
| Zm00001d030694_P002 | Maize | mitochondrion | 81.11 | 65.55 |
| PGSC0003DMT400068505 | Potato | cytosol | 64.06 | 63.69 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 |
| GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant | UniProt:M1BQ94 |
| PFAM:PF03810 | PFAM:PF13513 | EnsemblPlantsGene:PGSC0003DMG400019597 | PGSC:PGSC0003DMG400019597 | EnsemblPlants:PGSC0003DMT400050414 | PFscan:PS50166 |
| PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI0002953B34 | SEG:seg |
Description
Importin beta-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400019597]
Coordinates
chr6:-:38386104..38394873
Molecular Weight (calculated)
96002.2 Da
IEP (calculated)
4.325
GRAVY (calculated)
-0.023
Length
868 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVTQVLLNA QSVDSTVRKH AEETLKQFQE QNLPGFLLSL SGELASEEKP VDSRKLAGLI LKNALDAKEQ HRKYELVQRW LSLDVAVKTQ IKTCLLQTLS
101: SPAPDARSTA SQVIAKVAGI ELPQKQWPEL IGSLLSNQQL PAHIKQATLE TLGYLCEEVS PDVMEQDQVN KILTAVIQGM NAEEKNNDVR LAATRALYNA
201: LGFAQANFTN DMERDFIMRV VCQATLSPEV KIRQAAFECL VSISSTYYEK LAPYIQDIFS ITAKAVREDE EPVALQAIEF WSSICDEEID ILEDYGGDFT
301: ADSDVPCYNF IKQALPALVP MLLETLLKQE EDQDQDEVAW NLAMAGGTCL GLVARTVGDD IVPLVMPFIE ENITKPDWRQ REAATYAFGS ILEGPSPDKL
401: TPIVNGALNF MLTALTKDAN SHVKDTTAWT LGRIFEFLHG STVEIPIITP ANCQQIITVL LQSMKDAPNV AEKACGALYF LAQGYGDVAA SSPLTPFFQE
501: MVQSLLTATH REDAGESRLR TAAYEALNEV VRCSTDETVP MVLQLVPVIM MELHQTLEAQ KLSSDEREKQ SELQGLLCGC LQVIIQKLGS SEQTKYAFSQ
601: YADQIMSLFL RVFACRSATV HEEAMLSIGA LAYATGPDFA KYMPEFYKYL EMGLQNFEEY QVCAVTVGVV GDLCRALEDK ILPYCDGIMT QLLKDLSSNQ
701: LHRSVKPPIF SCFGDIALAI GENFEKYLMY AMPMLQSAAE LSARATGADD EILDYTNLLR NGILEAYSGI FQGFKNSPKT QLLIPYAPHI LQFLDSIYME
801: KDMDDVVMKT AIGVLGDLAD TLGSNAGSLI QQSVSSKDFL IECLSSDDHL IKESAEWAQM AISRAISV
101: SPAPDARSTA SQVIAKVAGI ELPQKQWPEL IGSLLSNQQL PAHIKQATLE TLGYLCEEVS PDVMEQDQVN KILTAVIQGM NAEEKNNDVR LAATRALYNA
201: LGFAQANFTN DMERDFIMRV VCQATLSPEV KIRQAAFECL VSISSTYYEK LAPYIQDIFS ITAKAVREDE EPVALQAIEF WSSICDEEID ILEDYGGDFT
301: ADSDVPCYNF IKQALPALVP MLLETLLKQE EDQDQDEVAW NLAMAGGTCL GLVARTVGDD IVPLVMPFIE ENITKPDWRQ REAATYAFGS ILEGPSPDKL
401: TPIVNGALNF MLTALTKDAN SHVKDTTAWT LGRIFEFLHG STVEIPIITP ANCQQIITVL LQSMKDAPNV AEKACGALYF LAQGYGDVAA SSPLTPFFQE
501: MVQSLLTATH REDAGESRLR TAAYEALNEV VRCSTDETVP MVLQLVPVIM MELHQTLEAQ KLSSDEREKQ SELQGLLCGC LQVIIQKLGS SEQTKYAFSQ
601: YADQIMSLFL RVFACRSATV HEEAMLSIGA LAYATGPDFA KYMPEFYKYL EMGLQNFEEY QVCAVTVGVV GDLCRALEDK ILPYCDGIMT QLLKDLSSNQ
701: LHRSVKPPIF SCFGDIALAI GENFEKYLMY AMPMLQSAAE LSARATGADD EILDYTNLLR NGILEAYSGI FQGFKNSPKT QLLIPYAPHI LQFLDSIYME
801: KDMDDVVMKT AIGVLGDLAD TLGSNAGSLI QQSVSSKDFL IECLSSDDHL IKESAEWAQM AISRAISV
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.