Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050414 | Potato | cytosol | 91.5 | 91.82 |
| Solyc03g082940.2.1 | Tomato | plastid | 99.54 | 90.88 |
| CDY35657 | Canola | cytosol | 86.68 | 86.98 |
| CDY14379 | Canola | cytosol | 86.57 | 86.87 |
| Bra003054.1-P | Field mustard | cytosol | 86.45 | 86.75 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 83.35 | 86.43 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 78.65 | 85.52 |
| AT5G53480.1 | Thale cress | cytosol | 85.3 | 85.4 |
| VIT_16s0098g01630.t01 | Wine grape | plastid | 92.19 | 84.53 |
| Os12t0568800-01 | Rice | plasma membrane | 67.51 | 83.64 |
| KRH53541 | Soybean | cytosol | 83.47 | 83.47 |
| TraesCS5A01G077200.1 | Wheat | golgi | 83.35 | 83.26 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 83.35 | 83.26 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 83.01 | 82.91 |
| TraesCS5A01G082600.1 | Wheat | golgi | 83.01 | 82.91 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 83.01 | 82.91 |
| TraesCS5D01G095100.1 | Wheat | golgi | 83.01 | 82.91 |
| EES16185 | Sorghum | cytosol | 82.89 | 82.8 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 82.78 | 82.68 |
| HORVU5Hr1G021530.2 | Barley | cytosol | 82.66 | 81.91 |
| KRH64395 | Soybean | peroxisome | 72.56 | 81.34 |
| GSMUA_Achr5P09570_001 | Banana | cytosol | 21.47 | 77.27 |
| Zm00001d041556_P002 | Maize | cytosol | 81.63 | 72.04 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 29.39 | 68.45 |
| Zm00001d030694_P002 | Maize | mitochondrion | 81.52 | 66.11 |
| PGSC0003DMT400068505 | Potato | cytosol | 64.18 | 64.03 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:102595228 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 |
| GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant | UniProt:M1BL76 |
| PFAM:PF03810 | PFAM:PF13513 | EnsemblPlantsGene:PGSC0003DMG400018525 | PGSC:PGSC0003DMG400018525 | EnsemblPlants:PGSC0003DMT400047662 | PFscan:PS50166 |
| PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI000295914B | RefSeq:XP_006350520.1 |
| SEG:seg | : | : | : | : | : |
Description
Importin beta-1 [Source:PGSC_GENE;Acc:PGSC0003DMG400018525]
Coordinates
chr3:+:48119382..48124290
Molecular Weight (calculated)
96406.8 Da
IEP (calculated)
4.336
GRAVY (calculated)
-0.023
Length
871 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEVTQILL NAQSVDSTVR KHSEETLKQF QEQNLPGFLL SLSGELANEE KPVDSRKLAG LILKNALDAK EQHRKFELVQ RWLSLDMAVK AQIKTCLLQT
101: LSSPVPDAHS TASQVIAKVA GIELPQKQWP ELIGSLLSNI HQVPAHVKQA TLETLGYLCE EVSPEVVDQD QVNKILTAVV QGMNAEEGNN DVRLAATRAL
201: YNALSFAQAN FSNDMERDFI MRVVCEATQS PEVKIRQAAF ECLVSISSTY YEKLAPYIQD IFNITAKAVK EDVEPVALQA IEFWSSICDE EIDILEDFGG
301: DFTADSDVPC YYFIKQALPA LVPMLLETLL KQEEDQDQDE GAWNLAMAGG TCLGLVARTV GDEIVPLVMP FIQENISKPD WRQREAATYA FGSILEGPSP
401: DKLTPLVNVA LNFMLTALTK DPNSHVKDTT AWTLGRIFEF LHGSTVETPI ITPANCQLII TVLLQAMKDA PNVAEKSCGA LYFLAQGYED MGASSPLTPY
501: FQEIVQELLT VTHREDAGES RLRTAAYETL NEVVRCSTDE TAPMVLQLAP IIMTELHQTL EGQKLSSDER EKQSELQGLL CGCLQVIIQK LGASEPTKFV
601: FMQYADQIMN LFLRVFACRN ATVHEEAMLA IGALAYATGP DFAKYMPEFY KYLEMGLQNF EEYQVCAVTV GVVGDVCRAL EDKILPYCDG IMTQLLKDLS
701: SNQLHRSVKP PIFSCLGDIA LAIGENFEKY LMYAMPMLQS AAELSAHTSG ADDEMVEYTN LLRNGILEAY SGIFQGFKNS PKTQLLIPYA PHILQFLDSI
801: YMEKDMDDVV MKTAIGVLGD LADTLGSNAG SLIQQSLSSK EFLNECLSSD DHLIKESAEW AKLAITRAIS V
101: LSSPVPDAHS TASQVIAKVA GIELPQKQWP ELIGSLLSNI HQVPAHVKQA TLETLGYLCE EVSPEVVDQD QVNKILTAVV QGMNAEEGNN DVRLAATRAL
201: YNALSFAQAN FSNDMERDFI MRVVCEATQS PEVKIRQAAF ECLVSISSTY YEKLAPYIQD IFNITAKAVK EDVEPVALQA IEFWSSICDE EIDILEDFGG
301: DFTADSDVPC YYFIKQALPA LVPMLLETLL KQEEDQDQDE GAWNLAMAGG TCLGLVARTV GDEIVPLVMP FIQENISKPD WRQREAATYA FGSILEGPSP
401: DKLTPLVNVA LNFMLTALTK DPNSHVKDTT AWTLGRIFEF LHGSTVETPI ITPANCQLII TVLLQAMKDA PNVAEKSCGA LYFLAQGYED MGASSPLTPY
501: FQEIVQELLT VTHREDAGES RLRTAAYETL NEVVRCSTDE TAPMVLQLAP IIMTELHQTL EGQKLSSDER EKQSELQGLL CGCLQVIIQK LGASEPTKFV
601: FMQYADQIMN LFLRVFACRN ATVHEEAMLA IGALAYATGP DFAKYMPEFY KYLEMGLQNF EEYQVCAVTV GVVGDVCRAL EDKILPYCDG IMTQLLKDLS
701: SNQLHRSVKP PIFSCLGDIA LAIGENFEKY LMYAMPMLQS AAELSAHTSG ADDEMVEYTN LLRNGILEAY SGIFQGFKNS PKTQLLIPYA PHILQFLDSI
801: YMEKDMDDVV MKTAIGVLGD LADTLGSNAG SLIQQSLSSK EFLNECLSSD DHLIKESAEW AKLAITRAIS V
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.