Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
plastid: 27992503 plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P09570_001 | Banana | cytosol | 27.45 | 79.75 |
| EES16185 | Sorghum | cytosol | 94.45 | 76.15 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 94.31 | 76.03 |
| TraesCS5A01G082600.1 | Wheat | golgi | 94.31 | 76.03 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 94.31 | 76.03 |
| TraesCS5D01G095100.1 | Wheat | golgi | 94.17 | 75.92 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 93.88 | 75.69 |
| TraesCS5A01G077200.1 | Wheat | golgi | 93.88 | 75.69 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 93.46 | 75.34 |
| Solyc06g052030.2.1 | Tomato | plastid | 83.78 | 75.22 |
| HORVU5Hr1G021530.2 | Barley | cytosol | 93.03 | 74.4 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 78.95 | 69.29 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 82.79 | 69.29 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 36.27 | 68.18 |
| PGSC0003DMT400050414 | Potato | cytosol | 83.93 | 67.97 |
| PGSC0003DMT400047662 | Potato | cytosol | 83.64 | 67.51 |
| Zm00001d041556_P002 | Maize | cytosol | 94.03 | 66.97 |
| KRH41369 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.65 | 66.78 |
| KRH60084 | Soybean | cytosol, endoplasmic reticulum, nucleus | 82.36 | 66.55 |
| CDY35657 | Canola | cytosol | 81.93 | 66.36 |
| CDY14379 | Canola | cytosol | 81.79 | 66.24 |
| Bra003054.1-P | Field mustard | cytosol | 81.65 | 66.13 |
| AT5G53480.1 | Thale cress | cytosol | 81.37 | 65.75 |
| KRH53541 | Soybean | cytosol | 78.52 | 63.38 |
| VIT_16s0098g01630.t01 | Wine grape | plastid | 85.35 | 63.16 |
| KRH64395 | Soybean | peroxisome | 68.14 | 61.65 |
| Solyc03g082940.2.1 | Tomato | plastid | 83.5 | 61.53 |
| Zm00001d030694_P002 | Maize | mitochondrion | 92.89 | 60.8 |
| Os03t0294600-01 | Rice | cytosol | 28.16 | 53.37 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 62.87 | 50.92 |
| Os04t0691500-01 | Rice | cytosol, plasma membrane | 16.36 | 14.97 |
| Os04t0691600-02 | Rice | plastid | 0.71 | 3.45 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | UniProt:A0A0P0YBG5 | InterPro:ARM-like | InterPro:ARM-type_fold | ProteinID:BAT17719.1 |
| ProteinID:BAT17721.1 | GO:GO:0000060 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 |
| GO:GO:0006606 | GO:GO:0006607 | GO:GO:0006610 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 |
| GO:GO:0008139 | GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0016020 | GO:GO:0031965 | GO:GO:0034399 | InterPro:IPR011989 | InterPro:KPNB1_plant | EnsemblPlantsGene:Os12g0568800 |
| EnsemblPlants:Os12t0568800-01 | PFAM:PF13513 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SUPFAM:SSF48371 | UniParc:UPI000393B77C |
| SEG:seg | : | : | : | : | : |
Description
Similar to predicted protein. (Os12t0568800-01);Similar to predicted protein. (Os12t0568800-02);Non-protein coding transcript. (Os12t0568800-03)
Coordinates
chr12:+:23404675..23407835
Molecular Weight (calculated)
77484.9 Da
IEP (calculated)
4.223
GRAVY (calculated)
0.060
Length
703 amino acids
Sequence
(BLAST)
(BLAST)
001: DQVNKILTAV VQGMNASEGN SDVRLAATRA LYNALGFAQV NFSNDMERDY IMRVVCEATQ STDVKIRQAA FECLVAISST YYDKLATYMQ DIFNITAKAV
101: RGDEESVALQ AIEFWSSICD EEIDILDEYS SEFTADSDVP CYYFIKQALP ALVPMLLETL LKQEEDQDLD EGAWNLAMAG GTCLGLVART VGDDIVPLVM
201: PFVEENITKP DWRHREAATY AFGSILEGPS ADKLAPLVNV ALNFMLSALV NDPSNHVKDT TAWTLGRIFE FLHGSALETA PIITSENCQQ ILTVLLQSMK
301: DVPNVAEKAC GALYFLAQGY VDAGSASPLT PFFQDIIQSL LFVTHREDAG ESRLRTAAYE TLNEVVRCSI EETGPIVMQL VPVIMMELHQ TLEAGKLSTD
401: EREKRSELQG LLCGCLQVII QKLGAMESTK YSFLQYADQM MELFLRVFAC RNATVHEEAM LAIGALAYAA GPNFSKYMPQ FYQYLEMGLQ NFEEYQVCAI
501: TVGVVGDLCR ALEDKILPYC DGIMTQLLKD LSSNQLHRSV KPPIFSCFGD IALAIGENFE KYLIYAMPML QSAADLSAHA AAADDEMLDY TNQLRNGILE
601: AYSGILQGFK SSPKTQLLMQ YAPNILNFLD ALYNGKDMDD TVMKTAIGVL GDLADTLGVH AGPLINQSIS SKKFLEECLA SDDPLVKESA DWARVAISRA
701: VSG
101: RGDEESVALQ AIEFWSSICD EEIDILDEYS SEFTADSDVP CYYFIKQALP ALVPMLLETL LKQEEDQDLD EGAWNLAMAG GTCLGLVART VGDDIVPLVM
201: PFVEENITKP DWRHREAATY AFGSILEGPS ADKLAPLVNV ALNFMLSALV NDPSNHVKDT TAWTLGRIFE FLHGSALETA PIITSENCQQ ILTVLLQSMK
301: DVPNVAEKAC GALYFLAQGY VDAGSASPLT PFFQDIIQSL LFVTHREDAG ESRLRTAAYE TLNEVVRCSI EETGPIVMQL VPVIMMELHQ TLEAGKLSTD
401: EREKRSELQG LLCGCLQVII QKLGAMESTK YSFLQYADQM MELFLRVFAC RNATVHEEAM LAIGALAYAA GPNFSKYMPQ FYQYLEMGLQ NFEEYQVCAI
501: TVGVVGDLCR ALEDKILPYC DGIMTQLLKD LSSNQLHRSV KPPIFSCFGD IALAIGENFE KYLIYAMPML QSAADLSAHA AAADDEMLDY TNQLRNGILE
601: AYSGILQGFK SSPKTQLLMQ YAPNILNFLD ALYNGKDMDD TVMKTAIGVL GDLADTLGVH AGPLINQSIS SKKFLEECLA SDDPLVKESA DWARVAISRA
701: VSG
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.