Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16185 | Sorghum | cytosol | 86.32 | 97.71 |
| Os12t0568800-01 | Rice | plasma membrane | 66.97 | 94.03 |
| TraesCS5A01G082600.1 | Wheat | golgi | 82.27 | 93.12 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 82.17 | 93.0 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 82.17 | 93.0 |
| TraesCS5D01G095100.1 | Wheat | golgi | 82.07 | 92.89 |
| TraesCS5A01G077200.1 | Wheat | golgi | 81.76 | 92.55 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 81.76 | 92.55 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 81.26 | 91.97 |
| HORVU5Hr1G021530.2 | Barley | cytosol | 81.36 | 91.35 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 68.59 | 84.52 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 71.12 | 83.57 |
| Solyc06g052030.2.1 | Tomato | plastid | 64.84 | 81.74 |
| PGSC0003DMT400050414 | Potato | cytosol | 71.83 | 81.68 |
| PGSC0003DMT400047662 | Potato | cytosol | 72.04 | 81.63 |
| KRH41369 | Soybean | cytosol, endoplasmic reticulum, nucleus | 70.72 | 80.23 |
| KRH60084 | Soybean | cytosol, endoplasmic reticulum, nucleus | 70.21 | 79.66 |
| CDY35657 | Canola | cytosol | 69.5 | 79.03 |
| AT5G53480.1 | Thale cress | cytosol | 69.6 | 78.97 |
| GSMUA_Achr5P09570_001 | Banana | cytosol | 19.35 | 78.93 |
| CDY14379 | Canola | cytosol | 69.4 | 78.92 |
| Bra003054.1-P | Field mustard | cytosol | 69.3 | 78.8 |
| Zm00001d030694_P002 | Maize | mitochondrion | 84.9 | 78.03 |
| KRH53541 | Soybean | cytosol | 68.39 | 77.5 |
| VIT_16s0098g01630.t01 | Wine grape | plastid | 74.57 | 77.47 |
| KRH64395 | Soybean | peroxisome | 60.79 | 77.22 |
| Solyc03g082940.2.1 | Tomato | plastid | 73.05 | 75.58 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 25.23 | 66.58 |
| Zm00001d038021_P001 | Maize | plastid | 54.31 | 60.98 |
| Zm00001d010512_P001 | Maize | plastid | 52.99 | 59.7 |
| Zm00001d002936_P010 | Maize | cytosol | 17.12 | 18.97 |
| Zm00001d026696_P005 | Maize | cytosol | 17.02 | 18.88 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | UniProt:A0A1D6MWV6 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 |
| GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant | ProteinID:ONM33240.1 |
| ProteinID:ONM33241.1 | PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 |
| SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI000844F48E | EnsemblPlantsGene:Zm00001d041556 | EnsemblPlants:Zm00001d041556_P002 | EnsemblPlants:Zm00001d041556_T002 |
| SEG:seg | : | : | : | : | : |
Description
Importin subunit beta-1
Coordinates
chr3:-:127113053..127118515
Molecular Weight (calculated)
107946.0 Da
IEP (calculated)
4.369
GRAVY (calculated)
-0.018
Length
987 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEDGFTAT CLAAGVRADR GWATGGRATC PAWDLDLDAE CWTAGGWAAG SSSLGYAWAR WPAPALECSD ARALECSDAR ARSQVLGTQD PRVARRLGLM
101: PAAGGWRLGG WGRVNMSLDV TQVLLSAQSA DGAIRKHAEE SLMQFQEQNL PGFLLSLSSE MASEEKPEES RRLAGLILKN ALDAKEQHRK NELFQRWLAL
201: DTGAKAHIKG LLLQTLTSSV ASARSTASQV IAKVAGIEIP QKQWPELIGS LLANIHQVQP NVKQATLETL GYLCEEVSPD AVEQDQVNKI LTAVVQGMNA
301: SEANSDVRLA ATRALYNALG FAQVNFSNDM ERDYIMRVVC EATQSPEVKI RQAAFECLVA ISSTYYDKLA TDMQDIFNIT AKAVRGDEES VALQAIEFWS
401: SICDEEIDIL DEYSSEFTAD SDVPCYYFIK QALPALVPML LETLLKQEED QDLDEGAWNL AMAGGTCLGL VARTVGDDIV PLVMPFVEEN ITKSEWRQRE
501: AATYAFGSIL EGPSADKLAP LVNVALGFML SALMKDPSNH VKDTTAWTLG RIFEFLHGSA LETPPIITGE NCQQILTVLL HSMKDVPNVA EKACGALYFL
601: AQGYVDAGSA SPLSPFFQDI VQNLLMVTHR DDAGESRLRT AAYETLNEVV RCSTEETAPI VMQLVPVIMV ELHQTLEAEK LSTDEREKRS ELQGLLCGCL
701: QVIIQKLGGM ESTKYSFLQY ADQMMDLFLK VFACRNATVH EEAMLAIGAL AYAAGPNFAK YMTQFYQYLE MGLQNFEEYQ VCAITVGVVG DLCRALEDKI
801: LPFCDGIMTQ LLKDLSSNQL HRSVKPPIFS CFGDIALAIG EDFEKYLIYA MPMLQSAADL SAHTTATDDE MLDYTNQLRN GILEAYSGIL QGFKSSPKTQ
901: LLMPFAPHII QFLDALYNGK DMDDTVMKTA IGVLGDLADT LGVHAGPLIN QSTSSQAFLE ECLASDDPLV KESADWARIA VSRAVSG
101: PAAGGWRLGG WGRVNMSLDV TQVLLSAQSA DGAIRKHAEE SLMQFQEQNL PGFLLSLSSE MASEEKPEES RRLAGLILKN ALDAKEQHRK NELFQRWLAL
201: DTGAKAHIKG LLLQTLTSSV ASARSTASQV IAKVAGIEIP QKQWPELIGS LLANIHQVQP NVKQATLETL GYLCEEVSPD AVEQDQVNKI LTAVVQGMNA
301: SEANSDVRLA ATRALYNALG FAQVNFSNDM ERDYIMRVVC EATQSPEVKI RQAAFECLVA ISSTYYDKLA TDMQDIFNIT AKAVRGDEES VALQAIEFWS
401: SICDEEIDIL DEYSSEFTAD SDVPCYYFIK QALPALVPML LETLLKQEED QDLDEGAWNL AMAGGTCLGL VARTVGDDIV PLVMPFVEEN ITKSEWRQRE
501: AATYAFGSIL EGPSADKLAP LVNVALGFML SALMKDPSNH VKDTTAWTLG RIFEFLHGSA LETPPIITGE NCQQILTVLL HSMKDVPNVA EKACGALYFL
601: AQGYVDAGSA SPLSPFFQDI VQNLLMVTHR DDAGESRLRT AAYETLNEVV RCSTEETAPI VMQLVPVIMV ELHQTLEAEK LSTDEREKRS ELQGLLCGCL
701: QVIIQKLGGM ESTKYSFLQY ADQMMDLFLK VFACRNATVH EEAMLAIGAL AYAAGPNFAK YMTQFYQYLE MGLQNFEEYQ VCAITVGVVG DLCRALEDKI
801: LPFCDGIMTQ LLKDLSSNQL HRSVKPPIFS CFGDIALAIG EDFEKYLIYA MPMLQSAADL SAHTTATDDE MLDYTNQLRN GILEAYSGIL QGFKSSPKTQ
901: LLMPFAPHII QFLDALYNGK DMDDTVMKTA IGVLGDLADT LGVHAGPLIN QSTSSQAFLE ECLASDDPLV KESADWARIA VSRAVSG
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.