CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0568800-01	Rice	plasma membrane	76.15	94.45
HORVU5Hr1G021580.1	Barley	cytosol	94.38	94.38
TraesCS5A01G082600.1	Wheat	golgi	94.38	94.38
TraesCS5B01G088700.1	Wheat	cytosol	94.27	94.27
TraesCS5D01G095100.1	Wheat	golgi	94.15	94.15
TraesCS5A01G077200.1	Wheat	golgi	93.92	93.92
TraesCS5D01G094600.1	Wheat	cytosol	93.81	93.81
TraesCS5B01G088400.1	Wheat	cytosol	93.23	93.23
HORVU5Hr1G021530.2	Barley	cytosol	93.12	92.38
Zm00001d041556_P002	Maize	cytosol	97.71	86.32
GSMUA_Achr3P25220_001	Banana	cytosol	78.33	85.27
GSMUA_Achr1P28070_001	Banana	cytosol	81.42	84.52
PGSC0003DMT400047662	Potato	cytosol	82.8	82.89
PGSC0003DMT400050414	Potato	cytosol	82.0	82.37
Solyc06g052030.2.1	Tomato	plastid	73.51	81.86
KRH41369	Soybean	cytosol, endoplasmic reticulum, nucleus	80.96	81.15
KRH60084	Soybean	cytosol, endoplasmic reticulum, nucleus	80.39	80.57
CDY35657	Canola	cytosol	79.7	80.07
CDY14379	Canola	cytosol	79.59	79.95
Bra003054.1-P	Field mustard	cytosol	79.47	79.84
GSMUA_Achr5P09570_001	Banana	cytosol	22.13	79.75
AT5G53480.1	Thale cress	cytosol	79.36	79.54
Zm00001d030694_P002	Maize	mitochondrion	97.02	78.77
KRH53541	Soybean	cytosol	78.1	78.19
KRH64395	Soybean	peroxisome	69.15	77.61
VIT_16s0098g01630.t01	Wine grape	plastid	84.17	77.26
Solyc03g082940.2.1	Tomato	plastid	82.68	75.58
GSMUA_Achr5P09580_001	Banana	cytosol	28.78	67.11
EES19347	Sorghum	cytosol	61.7	61.84
EES13277	Sorghum	cytosol	51.15	60.85
OQU83489	Sorghum	nucleus	2.29	60.61
EES11709	Sorghum	cytosol	19.27	18.9

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	EntrezGene:8068094	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5YPY1
EnsemblPlants:EES16185	ProteinID:EES16185	ProteinID:EES16185.1	GO:GO:0000060	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005635	GO:GO:0005737	GO:GO:0006606	GO:GO:0006607	GO:GO:0006610	GO:GO:0006810
GO:GO:0006886	GO:GO:0006913	GO:GO:0008139	GO:GO:0008150	GO:GO:0008536	GO:GO:0008565
GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0031965	GO:GO:0034399	InterPro:IPR001494
InterPro:IPR011989	InterPro:Importin-beta_N	InterPro:KPNB1_plant	PFAM:PF03810	PFAM:PF13513	PFscan:PS50166
PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913	EnsemblPlantsGene:SORBI_3008G135200	SUPFAM:SSF48371	unigene:Sbi.12568
UniParc:UPI0001A88592	RefSeq:XP_002442347.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:56394007..56399908

Molecular Weight (calculated)

95901.9 Da

IEP (calculated)

4.347

GRAVY (calculated)

0.005

Length

872 amino acids

Sequence
(BLAST)

001: MSLDVTQVLL SAQSADGAIR KHAEESLKQF QEQNLPGFLL SLSSELANEE KPEESRRLAG LILKNALDAK EQHRKNELFQ RWLALDAGAK AQIKGLLLQT
101: LTSPVASARS TASQVIAKVA GIEIPQKQWP ELIGSLLINI HQVQPNVKQA TLETLGYLCE EVSPDAVDQD QVNKILTAVV QGMNASEANS DVRLAATRAL
201: YNALGFAQVN FSNDMERDYI MRVVCEATQS PEVKIRQAAF ECLVAISSTY YDKLATYMQD IFNITAKAVR GDEESVALQA IEFWSSICDE EIDILDEYSS
301: EFTADSDVPC YYFIKQALPA LVPMLLETLL KQEEDQDLDE GAWNLAMAGG TCLGLVARTV GDDIVPLVMP FVEENITKSE WRQREAATYA FGSILEGPSA
401: DKLAPLVNVA LGFMLSALTK DPSNHVKDTT AWTLGRIFEF LHGSALETPP IITAENCQQI LTVLLHSMKD VPNVAEKACG ALYFLAQGYV DAGSASPLSP
501: FFQDIVQNLL MVTHREDAGE SRLRTAAYET LNEVVRCSTE AAAPIVMQLV PVIMVELHQT LETEKLSTDE REKRSELQGL LCGCLQVIIQ KLGGMESTKY
601: SFLQYADQMM DLFLRVFACR NATVHEEAML AIGALAYAAG PNFAKYMAQF YQYLEMGLQN FEEYQVCAIT VGVVGDLCRA LEDKILPFCD GIMTQLLKDL
701: SSNQLHRSVK PPIFSCFGDI ALAIGENFEK YLIYAMPMLQ SAADLSAHTT ATDDEMLDYT NQLRNGILEA YSGILQGFKS SPKTQLLMPY APHIIQFLDA
801: LYNGKDMDDT VMKTAIGVLG DLADTLGVHA GPLINQSTSS QAFLEECLAS DDPLVKESAD WARIAISRAV SG

Best Arabidopsis Sequence Match ( AT5G53480.1 )
(BLAST)

001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV

Arabidopsis Description

KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.