CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH53541	Soybean	cytosol	95.5	85.19
GSMUA_Achr5P09570_001	Banana	cytosol	23.04	73.97
PGSC0003DMT400047662	Potato	cytosol	81.34	72.56
PGSC0003DMT400050414	Potato	cytosol	80.18	71.77
GSMUA_Achr1P28070_001	Banana	cytosol	76.96	71.19
CDY14379	Canola	cytosol	79.28	70.97
KRH41369	Soybean	cytosol, endoplasmic reticulum, nucleus	79.41	70.92
Bra003054.1-P	Field mustard	cytosol	79.15	70.85
CDY35657	Canola	cytosol	79.02	70.74
KRH60084	Soybean	cytosol, endoplasmic reticulum, nucleus	79.15	70.69
AT5G53480.1	Thale cress	cytosol	78.25	69.89
GSMUA_Achr3P25220_001	Banana	cytosol	71.69	69.54
Solyc06g052030.2.1	Tomato	plastid	70.01	69.48
EES16185	Sorghum	cytosol	77.61	69.15
HORVU5Hr1G021580.1	Barley	cytosol	77.35	68.92
TraesCS5D01G095100.1	Wheat	golgi	77.35	68.92
TraesCS5A01G082600.1	Wheat	golgi	77.35	68.92
TraesCS5B01G088700.1	Wheat	cytosol	77.35	68.92
TraesCS5D01G094600.1	Wheat	cytosol	76.96	68.58
VIT_16s0098g01630.t01	Wine grape	plastid	83.78	68.53
TraesCS5A01G077200.1	Wheat	golgi	76.83	68.46
TraesCS5B01G088400.1	Wheat	cytosol	76.71	68.35
Os12t0568800-01	Rice	plasma membrane	61.65	68.14
HORVU5Hr1G021530.2	Barley	cytosol	76.83	67.92
Solyc03g082940.2.1	Tomato	plastid	81.08	66.04
Zm00001d041556_P002	Maize	cytosol	77.22	60.79
Zm00001d030694_P002	Maize	mitochondrion	77.86	56.33
GSMUA_Achr5P09580_001	Banana	cytosol	20.21	41.98
KRG90653	Soybean	cytosol	19.69	17.08
KRH36099	Soybean	cytosol	19.56	17.02

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	UniProt:A0A0R0KIF2	EMBL:ACUP02002765	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlantsGene:GLYMA_04G233700	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913
GO:GO:0008150	GO:GO:0008536	GO:GO:0008565	InterPro:IPR001494	InterPro:IPR011989	InterPro:Importin-beta_N
InterPro:KPNB1_plant	ProteinID:KRH64394.1	EnsemblPlants:KRH64395	ProteinID:KRH64395	ProteinID:KRH64395.1	PFAM:PF03810
PFAM:PF13513	PFscan:PS50166	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913	SUPFAM:SSF48371
UniParc:UPI0006EDFEFE	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:50243517..50248136

Molecular Weight (calculated)

86622.2 Da

IEP (calculated)

4.376

GRAVY (calculated)

-0.003

Length

777 amino acids

Sequence
(BLAST)

001: MAMEVTQVLL SAQSIDGNVR KHAEDSLRQF QEQNLPGFLV SLSGELASED KPVDSRKLAG LILKNALDAK DENRKQELVQ RWLSLDPVAK TQVKSCLLQT
101: LSSLVPDARS TATQVIAKVA GIELPQKQWP ELIGSLLSNI HQVPTHVKQA TLETLGYLCE EVSPQVVDQD QVNKILTAVV QGMNASEGNN DVRLAATRAL
201: YNALGFAQAN FSNDMERDYI MRVVCETTVC PELKIRQAAF ECLVSIAAMY YEKLAPYIQD IYNITAKAVR VDEEPVALQA IEFWSTICDE ETDILEEYMG
301: DSNGDSDIPC FYFIKQALPA LIPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARTV GDDIVPLVMP FIEENITKPD WRQREAASYA FGSILEGPSP
401: DKLAPLVNHA LPFMLSALVK DPNNHVKDTT AWTLGRMFEF LHSSIVGTPI INEGNCQQII TVLLQSMKDV PNVAEKACGA LYFLAQGYED VGPTSPLTPL
501: FQEIVQSLLT VTHREDATES RLRTAAYETL NEVVRCSTDE TATLVVQLVS VIMMELHKCL EAQNLSSDER EKRSELIGLL CGCMQVIIQK LGSLDSTKYV
601: LVQYSDQIMR LFFRVFACRN ATAHEEAMLA IGALAYSIGQ EFSNYMPEFY KFLEMDLQNF EEYQVCAVTV GVIGDICRAL ELKILPYCDG IMTQLLKNLS
701: SDNLHRSVKP PLFSCIGDIA LAIGDNFNKY LMYAMNTLQL AAEMYAHTSG FDDEMTGVYQ FFEKWDIRGI FCDFSRV

Best Arabidopsis Sequence Match ( AT5G53480.1 )
(BLAST)

001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV

Arabidopsis Description

KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.