Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14379 | Canola | cytosol | 94.94 | 95.16 |
| CDY35657 | Canola | cytosol | 94.94 | 95.16 |
| Bra003054.1-P | Field mustard | cytosol | 94.83 | 95.05 |
| PGSC0003DMT400047662 | Potato | cytosol | 85.4 | 85.3 |
| PGSC0003DMT400050414 | Potato | cytosol | 84.48 | 84.68 |
| Solyc06g052030.2.1 | Tomato | plastid | 75.52 | 83.91 |
| Os12t0568800-01 | Rice | plasma membrane | 65.75 | 81.37 |
| GSMUA_Achr3P25220_001 | Banana | cytosol | 74.71 | 81.15 |
| GSMUA_Achr1P28070_001 | Banana | cytosol | 78.16 | 80.95 |
| KRH53541 | Soybean | cytosol | 80.57 | 80.48 |
| VIT_16s0098g01630.t01 | Wine grape | plastid | 87.13 | 79.79 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 79.77 | 79.59 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 79.66 | 79.47 |
| EES16185 | Sorghum | cytosol | 79.54 | 79.36 |
| TraesCS5A01G077200.1 | Wheat | golgi | 79.54 | 79.36 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 79.2 | 79.01 |
| TraesCS5A01G082600.1 | Wheat | golgi | 79.2 | 79.01 |
| TraesCS5D01G095100.1 | Wheat | golgi | 79.08 | 78.9 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 78.97 | 78.78 |
| KRH64395 | Soybean | peroxisome | 69.89 | 78.25 |
| Solyc03g082940.2.1 | Tomato | plastid | 85.75 | 78.2 |
| HORVU5Hr1G021530.2 | Barley | cytosol | 78.85 | 78.04 |
| GSMUA_Achr5P09570_001 | Banana | cytosol | 20.69 | 74.38 |
| Zm00001d041556_P002 | Maize | cytosol | 78.97 | 69.6 |
| GSMUA_Achr5P09580_001 | Banana | cytosol | 27.7 | 64.44 |
| Zm00001d030694_P002 | Maize | mitochondrion | 78.39 | 63.5 |
| AT3G08947.1 | Thale cress | cytosol | 44.94 | 59.51 |
| AT2G16953.1 | Thale cress | cytosol | 1.61 | 21.88 |
| AT2G16950.1 | Thale cress | cytosol | 19.08 | 18.55 |
| AT2G16960.1 | Thale cress | cytosol | 10.11 | 15.94 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | EntrezGene:835429 | UniProt:A0A178UKY5 | ProteinID:AED96362.1 | EMBL:AK117217 |
| InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT5G53480 | EnsemblPlantsGene:AT5G53480 | RefSeq:AT5G53480 | TAIR:AT5G53480 |
| RefSeq:AT5G53480-TAIR-G | EnsemblPlants:AT5G53480.1 | TAIR:AT5G53480.1 | Unigene:At.21940 | ProteinID:BAB09724.1 | GO:GO:0000060 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005635 | GO:GO:0005737 | GO:GO:0006606 | GO:GO:0006607 |
| GO:GO:0006610 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008139 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0008565 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0031965 | GO:GO:0034399 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant |
| RefSeq:NP_200160.1 | ProteinID:OAO94413.1 | PFAM:PF03810 | PFAM:PF13513 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001040 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009073 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025034 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | UniProt:Q9FJD4 | SMART:SM00913 | SUPFAM:SSF48371 |
| UniParc:UPI00000A87B3 | SEG:seg | : | : | : | : |
Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
Coordinates
chr5:+:21713245..21717878
Molecular Weight (calculated)
96264.5 Da
IEP (calculated)
4.440
GRAVY (calculated)
-0.030
Length
870 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.