Factsheet for AT2G16960.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G16953.1	Thale cress	cytosol	5.98	51.56
GSMUA_Achr4P16360_001	Banana	cytosol	45.11	47.25
Bra013038.1-P	Field mustard	cytosol	62.68	39.27
CDY02225	Canola	cytosol	62.14	38.89
AT2G16950.1	Thale cress	cytosol	62.68	38.66
CDX89768	Canola	cytosol	61.23	38.63
Bra002011.1-P	Field mustard	cytosol	61.41	38.48
CDY47482	Canola	cytosol	61.23	38.28
CDY31391	Canola	cytosol	61.05	38.21
Bra037286.1-P	Field mustard	cytosol	61.78	38.1
VIT_03s0038g02830.t01	Wine grape	cytosol	53.8	33.15
KRG90653	Soybean	cytosol	52.72	32.48
Solyc01g111780.2.1	Tomato	nucleus, plastid	52.36	32.47
KRH36099	Soybean	cytosol	51.99	32.14
HORVU2Hr1G126610.7	Barley	cytosol	50.91	31.79
Zm00001d002936_P010	Maize	cytosol	50.91	31.54
EES11709	Sorghum	cytosol	50.72	31.5
TraesCS2D01G572700.1	Wheat	cytosol	51.09	31.44
TraesCS2B01G624100.1	Wheat	cytosol	51.09	31.44
TraesCS2A01G562500.1	Wheat	golgi	51.09	31.44
Zm00001d026696_P005	Maize	cytosol	49.64	30.79
CDY54431	Canola	cytosol	62.32	28.79
Os04t0691500-01	Rice	cytosol, plasma membrane	39.67	28.52
TraesCS2B01G426000.1	Wheat	cytosol	13.04	19.78
TraesCS3A01G329100.1	Wheat	cytosol, mitochondrion	26.63	14.98
AT3G08947.1	Thale cress	cytosol	15.4	12.94
AT5G53480.1	Thale cress	cytosol	15.94	10.11
Os04t0691600-02	Rice	plastid	1.45	5.52
CDY71774	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.2	EntrezGene:816199	ProteinID:AEC06564.2	InterPro:ARM-like	InterPro:ARM-type_fold
ArrayExpress:AT2G16960	EnsemblPlantsGene:AT2G16960	RefSeq:AT2G16960	TAIR:AT2G16960	RefSeq:AT2G16960-TAIR-G	EnsemblPlants:AT2G16960.1
TAIR:AT2G16960.1	UniProt:F4IMD5	GO:GO:0000060	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005635
GO:GO:0005737	GO:GO:0006607	GO:GO:0006610	GO:GO:0006810	GO:GO:0008139	GO:GO:0008150
GO:GO:0008565	GO:GO:0016020	GO:GO:0031965	GO:GO:0034399	InterPro:HEAT	InterPro:IPR011989
RefSeq:NP_001318234.1	PFAM:PF02985	PANTHER:PTHR10527	PANTHER:PTHR10527:SF3	SUPFAM:SSF48371	UniParc:UPI000848D7C5
SEG:seg	:	:	:	:	:

Description

ARM repeat superfamily protein [Source:TAIR;Acc:AT2G16960]

Coordinates

chr2:+:7364683..7368963

Molecular Weight (calculated)

62256.6 Da

IEP (calculated)

4.725

GRAVY (calculated)

0.115

Length

552 amino acids

Sequence
(BLAST)

001: MAYEDDDETL LNEEEWNLRA CSAKFIGILA NVFGDEILLT LMPLIEAKLS KFDDETWKER EAAVFAFGAI AEGCNSFFYP HLIVAILRRL LDDQSPLVRR
101: ITCWTLYQFG TYVFEESNLE NSKLFTKVLH GFRFKLLDSN IWVQEAACLA LTTFEEDAGD KLVPHLEKIL QQLMRAFGKY QKRNLKVLLD AIRALADSVG
201: INLNKRAYIK ILIPPLVSTL EQISNSDKDV IPLLKCFTSI SKALEVGFAP FSWYVFERCM DILQLQQLAK VDHDFAGVQY DQNIVVCSLE FFSGLSKGLV
301: SGIESLVSQS NLRDMLLKCF MDETPDVRES AFALICHLTK VLPDYLEPRL LEFLEIASQQ LSANFSGENL SAANNACKAI GELAVKYPQE VSPIVTNVVY
401: SLGMIIQLGE TLELKSLTTL VEYNAIELAM NSAITVGILA RIRPDLSARS IENFMKPWCM RLATLDDDST KENAFQGLCE MVKVNPSRYV SSVAFICLAI
501: ASWKDMENKV IQSEFSKVLI GYKNMLGKNS WEECLSVLDP LAKERLAARY QV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.