Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71774 | Canola | cytosol | 31.26 | 97.53 |
| Bra037286.1-P | Field mustard | cytosol | 98.19 | 96.87 |
| CDY26791 | Canola | cytosol | 13.93 | 96.09 |
| CDY31391 | Canola | cytosol | 93.54 | 93.65 |
| CDY26790 | Canola | cytosol | 12.46 | 93.22 |
| CDY02225 | Canola | cytosol | 92.75 | 92.86 |
| CDX89768 | Canola | cytosol | 90.6 | 91.43 |
| KRH36099 | Soybean | cytosol | 75.65 | 74.8 |
| VIT_03s0038g02830.t01 | Wine grape | cytosol | 75.54 | 74.44 |
| KRG90653 | Soybean | cytosol | 75.54 | 74.44 |
| Solyc01g111780.2.1 | Tomato | nucleus, plastid | 74.29 | 73.71 |
| HORVU2Hr1G126610.7 | Barley | cytosol | 69.31 | 69.23 |
| EES11709 | Sorghum | cytosol | 69.65 | 69.18 |
| Os04t0691500-01 | Rice | cytosol, plasma membrane | 60.14 | 69.14 |
| Zm00001d002936_P010 | Maize | cytosol | 69.76 | 69.14 |
| CDY54431 | Canola | cytosol | 92.98 | 68.7 |
| TraesCS2D01G572700.1 | Wheat | cytosol | 69.65 | 68.56 |
| TraesCS2B01G624100.1 | Wheat | cytosol | 69.65 | 68.56 |
| TraesCS2A01G562500.1 | Wheat | golgi | 69.65 | 68.56 |
| Zm00001d026696_P005 | Maize | cytosol | 68.52 | 67.98 |
| GSMUA_Achr4P16360_001 | Banana | cytosol | 40.32 | 67.55 |
| AT2G16960.1 | Thale cress | cytosol | 38.28 | 61.23 |
| TraesCS2B01G426000.1 | Wheat | cytosol | 15.4 | 37.36 |
| TraesCS3A01G329100.1 | Wheat | cytosol, mitochondrion | 35.67 | 32.11 |
| CDY14379 | Canola | cytosol | 18.69 | 19.01 |
| CDY35657 | Canola | cytosol | 18.69 | 19.01 |
| CDY44668 | Canola | cytosol | 18.69 | 18.9 |
| CDY53085 | Canola | cytosol | 18.69 | 18.9 |
| CDX99262 | Canola | cytosol | 8.15 | 15.72 |
| CDY28068 | Canola | cytosol | 8.38 | 15.29 |
| Os04t0691600-02 | Rice | plastid | 1.25 | 7.59 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.2 | GO:A0A078IBF9 | UniProt:A0A078IBF9 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlants:CDY47482 | ProteinID:CDY47482 | ProteinID:CDY47482.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0008536 | EnsemblPlantsGene:GSBRNA2T00087535001 | InterPro:HEAT | InterPro:IPR001494 | InterPro:IPR011989 |
| InterPro:Importin-beta_N | PFAM:PF02985 | PFAM:PF03810 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF3 |
| SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI0004EE9312 | SEG:seg | : | : |
Description
BnaA09g08910DBnaA09g08910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBF9]
Coordinates
chrLK032718:+:79962..86357
Molecular Weight (calculated)
98079.9 Da
IEP (calculated)
4.531
GRAVY (calculated)
-0.004
Length
883 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATTVWQPL NDGLTEICTL LEQQISPSSA VDKSQIWKQL QHFSQIPDFN NYLVFILVRA EGKSIEIRQA AGLLLKNNLK GAYPSMSQEN QKYIKSELLP
101: CLGAVDRNIR TTVGTIISVI VNIEEGSGWP ELLPALVTCL DSNDLNHMDG AMDALSKICE DIPHVLDSEV PGLAERPINV FLPRLYQQFF QSPHASLRKL
201: ALGCVNQYVI IMPSALYNSL DKYLQGLFLL ANDPVAEVRK LVCAAFVHLT EVLPSSIEPH LRNVMEYMLQ VNKDPDEEVA LEACEFWSAY CDAQLPSENL
301: KELLPRLIPV LLSNMAYADD DESLLDAEED ESQPDRNQDL KPRFHTSRLH GSEDFDDDDD DSFNVWNLRK CSAAAIDVLS NVFGDEILPA LMPLIQAKLS
401: TSGDEAWKER EAAVLTLGAI AEGCFNGLYP HLSEANDKFP LIRSISCWTL SRFGKYLIQE GGNPKGYEQF EKVLMGLLRR LLDSNKRVQE AACSAFATVE
501: EDAAEELVPH LGVILQHLMC AFGKYQRRNL RIVYDAIGTL ADSVREELNK PAYLEILMPP LVAKWQQLSN SDKDLFPLLE CFTSISQALG VGFAPFAQPV
601: FQRCMDIIQL QHMAKVDPAS AGAQYDREFI VCSLDLLSGL AEGLGSGIES LVSQTNLRDL LLNCCMDEAP DVRQSAFALM GDLARVFPAY LQPRLIEFLQ
701: VASQQLSTNL IGENLSVANN ACWAIGELAV KVRQEVSPIV TNVVSALALI LQHAEAVNKS LVENSAITLG RLAWIRPDLV APHMEHFMKP WCLALSMVRD
801: DLEKEDAFRG LCAVVKVNPS GGVSSLVVIC KAIASWHEIR SEDVNSEVSQ VLNGYKQMLG NSWAECWSAL DPPVKERLAR YQV
101: CLGAVDRNIR TTVGTIISVI VNIEEGSGWP ELLPALVTCL DSNDLNHMDG AMDALSKICE DIPHVLDSEV PGLAERPINV FLPRLYQQFF QSPHASLRKL
201: ALGCVNQYVI IMPSALYNSL DKYLQGLFLL ANDPVAEVRK LVCAAFVHLT EVLPSSIEPH LRNVMEYMLQ VNKDPDEEVA LEACEFWSAY CDAQLPSENL
301: KELLPRLIPV LLSNMAYADD DESLLDAEED ESQPDRNQDL KPRFHTSRLH GSEDFDDDDD DSFNVWNLRK CSAAAIDVLS NVFGDEILPA LMPLIQAKLS
401: TSGDEAWKER EAAVLTLGAI AEGCFNGLYP HLSEANDKFP LIRSISCWTL SRFGKYLIQE GGNPKGYEQF EKVLMGLLRR LLDSNKRVQE AACSAFATVE
501: EDAAEELVPH LGVILQHLMC AFGKYQRRNL RIVYDAIGTL ADSVREELNK PAYLEILMPP LVAKWQQLSN SDKDLFPLLE CFTSISQALG VGFAPFAQPV
601: FQRCMDIIQL QHMAKVDPAS AGAQYDREFI VCSLDLLSGL AEGLGSGIES LVSQTNLRDL LLNCCMDEAP DVRQSAFALM GDLARVFPAY LQPRLIEFLQ
701: VASQQLSTNL IGENLSVANN ACWAIGELAV KVRQEVSPIV TNVVSALALI LQHAEAVNKS LVENSAITLG RLAWIRPDLV APHMEHFMKP WCLALSMVRD
801: DLEKEDAFRG LCAVVKVNPS GGVSSLVVIC KAIASWHEIR SEDVNSEVSQ VLNGYKQMLG NSWAECWSAL DPPVKERLAR YQV
001: MAATAVVWQP RDDGLAEICS LLEQQISPSS VVDKSQIWKQ LQHFSQFPDF NNYLVFILVR AEGKSVEVRQ AAGLLLKNNL RGAYPSMTQE NQKYIKSELL
101: PCLGAADRNI RTTVGTIISV IVNIEGVSGW HELLPALVTC LDSNDLNHMD GAMDALSKIC EDIPHVLDTE VPGLAERPIN IFLPRLLQFF QSPHASLRKL
201: ALGSVNQYII IMPAALYNSL DKYLQGLFVL ANDPVPEVRK LVCAAFVHLT EVLPSSIEPH LRNVMEYMLQ VNRDPDEEVS LEACEFWSAY CDAQLPPENL
301: KEFLPRLIPV LLENMAYADD DESLLDAEED ESQPDRDQDL KPRFHTSRLH GSEDFDDDDD DSFNVWNLRK CSAAAIDVLS NVFGDEILPA LMPLIQKNLS
401: ASGDEAWKQR EAAVLALGAI AEGCMNGLYP HLSEIVAFLL PLLDDKFPLI RSISCWTLSR FGKYLIQESG NPKGYEQFEK VLMGLLRRLL DTNKRVQEAA
501: CSAFATVEED AAEELVPHLG VILQHLMCAF GKYQRRNLRI VYDAIGTLAD SVREELNKPA YLEILMPPLV AKWQQLSNSD KDLFPLLECF TSISQALGVG
601: FAPFAQPVFQ RCMDIIQLQQ LAKVNPASAG AQYDREFIVC SLDLLSGLAE GLGSGIESLV QQSNLRDLLL NCCIDEAADV RQSAFALMGD LARVFPVYLQ
701: PRLLDFLEIA SQQLSANLNR ENLSVANNAC WAIGELAVKV RQEVSPIVAK VVSSLGLILQ HGEGVNKALV ENSAITLGRL AWIRPDLVAP HMDHFMKPWC
801: MALSMVRDDI EKEDAFRGLC AVVKVNPSGG VSSLVFICQA IASWHEIRSE DVQTEVSQVL NGYKHMLGNS WAECLSALDP PVKERLARYQ V
101: PCLGAADRNI RTTVGTIISV IVNIEGVSGW HELLPALVTC LDSNDLNHMD GAMDALSKIC EDIPHVLDTE VPGLAERPIN IFLPRLLQFF QSPHASLRKL
201: ALGSVNQYII IMPAALYNSL DKYLQGLFVL ANDPVPEVRK LVCAAFVHLT EVLPSSIEPH LRNVMEYMLQ VNRDPDEEVS LEACEFWSAY CDAQLPPENL
301: KEFLPRLIPV LLENMAYADD DESLLDAEED ESQPDRDQDL KPRFHTSRLH GSEDFDDDDD DSFNVWNLRK CSAAAIDVLS NVFGDEILPA LMPLIQKNLS
401: ASGDEAWKQR EAAVLALGAI AEGCMNGLYP HLSEIVAFLL PLLDDKFPLI RSISCWTLSR FGKYLIQESG NPKGYEQFEK VLMGLLRRLL DTNKRVQEAA
501: CSAFATVEED AAEELVPHLG VILQHLMCAF GKYQRRNLRI VYDAIGTLAD SVREELNKPA YLEILMPPLV AKWQQLSNSD KDLFPLLECF TSISQALGVG
601: FAPFAQPVFQ RCMDIIQLQQ LAKVNPASAG AQYDREFIVC SLDLLSGLAE GLGSGIESLV QQSNLRDLLL NCCIDEAADV RQSAFALMGD LARVFPVYLQ
701: PRLLDFLEIA SQQLSANLNR ENLSVANNAC WAIGELAVKV RQEVSPIVAK VVSSLGLILQ HGEGVNKALV ENSAITLGRL AWIRPDLVAP HMDHFMKPWC
801: MALSMVRDDI EKEDAFRGLC AVVKVNPSGG VSSLVFICQA IASWHEIRSE DVQTEVSQVL NGYKHMLGNS WAECLSALDP PVKERLARYQ V
Arabidopsis Description
TRN1transportin 1 [Source:TAIR;Acc:AT2G16950]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.