Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0092g00320.t01 | Wine grape | cytosol | 4.15 | 46.34 |
| CDY53085 | Canola | cytosol | 58.08 | 30.47 |
| CDY44668 | Canola | cytosol | 57.86 | 30.36 |
| CDY14379 | Canola | cytosol | 49.56 | 26.15 |
| CDY35657 | Canola | cytosol | 49.34 | 26.04 |
| CDY28068 | Canola | cytosol | 15.28 | 14.46 |
| CDY26790 | Canola | cytosol | 2.84 | 11.02 |
| CDY26791 | Canola | cytosol | 2.4 | 8.59 |
| CDY47482 | Canola | cytosol | 15.72 | 8.15 |
| CDX89768 | Canola | cytosol | 15.5 | 8.11 |
| CDY02225 | Canola | cytosol | 15.07 | 7.82 |
| CDY31391 | Canola | cytosol | 15.07 | 7.82 |
| CDY54431 | Canola | cytosol | 15.07 | 5.77 |
| CDY71774 | Canola | cytosol | 3.06 | 4.95 |
Protein Annotations
| EnsemblPlants:CDX99262 | EnsemblPlantsGene:GSBRNA2T00107508001 | Gene3D:1.25.10.10 | GO:A0A078EDY1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008565 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:KPNB1_plant | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | ProteinID:CDX99262 |
| ProteinID:CDX99262.1 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI0004EE90FC | MapMan:35.1 | : |
Description
BnaC05g33770D
Coordinates
chrLK031909:+:652545..654197
Molecular Weight (calculated)
50172.2 Da
IEP (calculated)
4.559
GRAVY (calculated)
0.200
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQQGIPAQV KQSTLETICY VCQETSLLVN HEVNNVIRAV LRGNLPSEPI GVRLAATKAL LNVLGFAQAN FGNEMECRLI MRVVYRAAMS QEVEIREVAF
101: QCLVSIASKY YEVLGWPYAE LFDITLKAIN GDVHSVSLQA IAFWNSICDV EMELLQAHSD FIKYHIPHLI PILLESLEGE EGQEDKVDAV MNFIPKLLSQ
201: ILKKLGHTLD MQIDDGREKQ QASSLCGLLQ LIVEKLSGTD KTKHLVLQNA DAIMTMLLRV LATSRGGGGE AMLATGALAC ATGPAFEKYV PELENFEECS
301: ITVGVVGDIC RAIDDKILLP FCDQIMSLLL KNLQSDELPR SVKPLIFSCI RNIALAIGVH FSERYLTPIL VEIMQGAAGE VCAQQSDEEL RKSVLEAYSG
401: ILQGCGDAKA EVMMMPYAQY LLQFIDLNAQ TAEGVVVQAA VAATGDLADA LDKRQSSC
101: QCLVSIASKY YEVLGWPYAE LFDITLKAIN GDVHSVSLQA IAFWNSICDV EMELLQAHSD FIKYHIPHLI PILLESLEGE EGQEDKVDAV MNFIPKLLSQ
201: ILKKLGHTLD MQIDDGREKQ QASSLCGLLQ LIVEKLSGTD KTKHLVLQNA DAIMTMLLRV LATSRGGGGE AMLATGALAC ATGPAFEKYV PELENFEECS
301: ITVGVVGDIC RAIDDKILLP FCDQIMSLLL KNLQSDELPR SVKPLIFSCI RNIALAIGVH FSERYLTPIL VEIMQGAAGE VCAQQSDEEL RKSVLEAYSG
401: ILQGCGDAKA EVMMMPYAQY LLQFIDLNAQ TAEGVVVQAA VAATGDLADA LDKRQSSC
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.