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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44668 Canola cytosol 99.43 99.43
AT3G08947.1 Thale cress cytosol 66.09 87.82
VIT_08s0058g00270.t01 Wine grape cytosol 75.03 75.11
PGSC0003DMT400068505 Potato cytosol 73.31 73.31
Os05t0353400-01 Rice cytosol, plasma membrane, plastid 67.93 68.32
GSMUA_Achr8P01910_001 Banana cytosol 62.66 68.12
TraesCS1D01G224400.2 Wheat golgi 66.9 67.28
EES19347 Sorghum cytosol 67.01 67.24
GSMUA_Achr10P... Banana cytosol 64.72 67.18
GSMUA_Achr5P28110_001 Banana cytosol 64.72 67.18
TraesCS1A01G222800.2 Wheat golgi, unclear 66.78 67.17
HORVU1Hr1G060180.2 Barley cytosol 66.78 67.17
TraesCS1B01G236100.3 Wheat cytosol 66.9 67.13
Zm00001d038021_P001 Maize plastid 67.58 67.12
EES13277 Sorghum cytosol 55.9 66.58
Zm00001d010512_P001 Maize plastid 66.21 65.98
TraesCS1A01G065600.1 Wheat cytosol 64.72 65.02
TraesCS1B01G083800.1 Wheat cytosol 64.49 64.79
TraesCS1D01G066600.1 Wheat cytosol 64.6 64.24
Solyc09g005010.2.1 Tomato endoplasmic reticulum 73.31 63.94
TraesCS4D01G193700.1 Wheat endoplasmic reticulum 62.89 62.24
TraesCS4B01G192500.1 Wheat endoplasmic reticulum 62.89 62.24
TraesCS4A01G111400.1 Wheat endoplasmic reticulum 62.89 62.24
CDY35657 Canola cytosol 60.71 61.06
CDY14379 Canola cytosol 60.6 60.94
Os03t0294600-01 Rice cytosol 25.43 59.84
HORVU1Hr1G013580.2 Barley cytosol, plastid 64.38 58.3
CDX99262 Canola cytosol 30.47 58.08
HORVU4Hr1G055910.2 Barley cytosol, plastid 62.77 56.67
TraesCS1A01G065000.1 Wheat cytosol 20.73 53.39
TraesCS7B01G222000.1 Wheat cytosol 44.44 46.8
TraesCS5D01G042900.2 Wheat cytosol 41.81 43.3
TraesCS5B01G034200.1 Wheat cytosol 41.01 43.18
TraesCS3D01G318400.1 Wheat cytosol, peroxisome, plastid 31.62 42.33
TraesCS5D01G022500.1 Wheat cytosol 33.1 40.7
CDY28068 Canola cytosol 22.34 40.29
TraesCS5D01G057000.1 Wheat cytosol 40.21 39.57
TraesCS5B01G051300.1 Wheat cytosol 39.52 38.9
TraesCS3A01G325000.1 Wheat cytosol 22.68 38.08
TraesCS2D01G434400.1 Wheat cytosol 21.19 37.37
TraesCS2D01G341200.1 Wheat cytosol 35.97 35.2
TraesCS2A01G435400.1 Wheat cytosol 31.5 34.46
TraesCS2B01G506500.1 Wheat cytosol 35.51 34.29
TraesCS2D01G480800.1 Wheat cytosol 35.17 34.07
TraesCS2B01G362200.1 Wheat cytosol 26.92 33.76
TraesCS2D01G480100.1 Wheat cytosol 34.71 32.58
TraesCS2B01G505600.1 Wheat cytosol 34.25 31.94
CDY31391 Canola cytosol 18.9 18.71
CDY47482 Canola cytosol 18.9 18.69
CDX89768 Canola cytosol 18.67 18.63
CDY02225 Canola cytosol 18.56 18.37
CDY71774 Canola cytosol 5.84 18.02
CDY54431 Canola cytosol 19.24 14.06
CDY26790 Canola cytosol 1.83 13.56
CDY26791 Canola cytosol 1.83 12.5
Protein Annotations
Gene3D:1.25.10.10MapMan:23.5.1.2.1GO:A0A078IPU9UniProt:A0A078IPU9InterPro:ARM-likeInterPro:ARM-type_fold
EnsemblPlants:CDY53085ProteinID:CDY53085ProteinID:CDY53085.1GO:GO:0003674GO:GO:0005215GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006810
GO:GO:0006886GO:GO:0006913GO:GO:0008150GO:GO:0008536GO:GO:0008565EnsemblPlantsGene:GSBRNA2T00008519001
InterPro:IPR001494InterPro:IPR011989InterPro:Importin-beta_NInterPro:KPNB1_plantPFAM:PF03810PFAM:PF13513
PFscan:PS50166PANTHER:PTHR10527PANTHER:PTHR10527:SF44SMART:SM00913SUPFAM:SSF48371UniParc:UPI0004EF40F6
SEG:seg:::::
Description
BnaCnng24150DBnaCnng24150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPU9]
Coordinates
chrLK033163:-:1949..5346
Molecular Weight (calculated)
96468.6 Da
IEP (calculated)
4.382
GRAVY (calculated)
-0.042
Length
873 amino acids
Sequence
(BLAST)
001: MAMEITQFLL AAQSADARVR TEAEGSLKQF QEQNLPQFLL SLSFELANNE KPSESRRLAG ILLKNSLDAK DSGRKELLVK QWCAIDLALK SQIKELLLRT
101: IGSSVPEARH TSAQVIAKVA SIEVPQKQWP ELVGSLLSNM TQQESPAHLK QSTLETLGYV CEEISHHDLV QDEVNSVLTA VVQGMNQAAN NAEVRLAATK
201: ALLNALDFSQ TNFENEMERS YIMKMVCETA CAKEAVIRQA AFECLVSIAS TYYEVLEQYM QTLFELTAKA VKEDEESVAL QAVEFWSTIC DEEIDRQEYD
301: SPDTGDSSPP HSGFIEKALP HLVPMLLETL EKQEEDQDHE DDVWNISMAG GTCLGLVART VGDGIVPLVM PFVEINIRKP NWRSREAATY AFGSILEGPT
401: IDKLAPMVAA GLEFLLTATK DENNHVRDTT AWTLSRIFEF LHTPDSGFSV ISPQNLPRIV GVLLESMKDV PNVAEKVCGA IYNLAQGYED AGASSSLLSP
501: YLTEIIQHLL AAAERTDGPE SKLRSASYET LNEVVRCSNL LEASGIIGQL LPVIMVKLGQ TMDLQVVSTE DREKQAELQA SLCGVLQVII QKLSSKDETK
601: PIVMQNADQI MMLFLRVFGC HSSSVHEEAM LAIGALAYAT GAEFAKYMPE LFKYLQTGLQ NFEEYQVCSI TVGVIGDICR ALDDKILPFC DQIMSLLIQN
701: LQSDALHRSV KPPIFSCFGD IALAIGGHFE RYVATALQIM QGAAQVCAQM DTLDEELMDY GNQLRRSIFE AYSGILQGFK DAKAELMVPY AQHLLQFVEL
801: VSKDSLSRDE SVTKAAVAAM GDLADVVGEK IKPLFSNFTF CGEFLNECLD SEDDDLKDTA RWTQGMIARL MVT
Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.