Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G325000.1 | Wheat | cytosol | 47.24 | 59.23 |
| EES13277 | Sorghum | cytosol | 49.39 | 43.93 |
| AT3G08947.1 | Thale cress | cytosol | 41.56 | 41.25 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 50.15 | 37.67 |
| TraesCS1D01G224400.2 | Wheat | golgi | 49.54 | 37.21 |
| EES19347 | Sorghum | cytosol | 49.54 | 37.13 |
| Zm00001d038021_P001 | Maize | plastid | 49.85 | 36.97 |
| Zm00001d010512_P001 | Maize | plastid | 48.31 | 35.96 |
| TraesCS1D01G066600.1 | Wheat | cytosol | 47.85 | 35.54 |
| TraesCS5D01G042900.2 | Wheat | cytosol | 45.71 | 35.35 |
| TraesCS5D01G057000.1 | Wheat | cytosol | 45.25 | 33.26 |
| TraesCS5D01G022500.1 | Wheat | cytosol | 35.43 | 32.54 |
| PGSC0003DMT400068505 | Potato | cytosol | 42.64 | 31.84 |
| CDY53085 | Canola | cytosol | 42.33 | 31.62 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 42.18 | 31.54 |
| Bra029733.1-P | Field mustard | cytosol | 42.18 | 31.54 |
| CDY44668 | Canola | cytosol | 42.18 | 31.5 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 41.41 | 30.61 |
| TraesCS5D01G095100.1 | Wheat | golgi | 39.57 | 29.59 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 39.57 | 29.59 |
| TraesCS2D01G341200.1 | Wheat | cytosol | 38.96 | 28.48 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 42.79 | 27.87 |
| TraesCS2D01G480800.1 | Wheat | cytosol | 38.19 | 27.64 |
| TraesCS2D01G480100.1 | Wheat | cytosol | 37.73 | 26.45 |
| Bra029635.1-P | Field mustard | cytosol | 8.74 | 23.08 |
| TraesCS2D01G434400.1 | Wheat | cytosol | 15.64 | 20.61 |
| CDY28068 | Canola | cytosol | 12.42 | 16.74 |
| TraesCS2D01G572700.1 | Wheat | cytosol | 15.95 | 11.59 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G318400.1 | EnsemblPlantsGene:TraesCS3D01G318400 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008565 | InterPro:ARM-type_fold | InterPro:KPNB1_plant | PANTHER:PTHR10527 |
| PANTHER:PTHR10527:SF44 | SEG:seg | SUPFAM:SSF48371 | MapMan:23.5.1.2.1 | : | : |
Description
No Description!
Coordinates
chr3D:+:432134660..432136787
Molecular Weight (calculated)
72728.7 Da
IEP (calculated)
4.845
GRAVY (calculated)
0.094
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAVCEILAK SEDLEIQQAI FECLAKIAST YYMLLQPYLR TILSLTESIA PQCMVFWCTV CKEVIKLREE QHIGAVDANS KYCCFIYEAL ELHVPVLLKH
101: LFKREKDQEG LVRMLLQHLF NQEEDQDGLV PMPLEHLLMQ EEDQGDDVMQ EEDQGDDVMQ EEDQEGDDCL LNIDIDCVTL LGLIARTIRD AIVPLVMQCI
201: EGNIKEPDWH SRMAAVSAIG FILEGPSVKG LAPLLDLLLD KMEDPNSKVK GTTAWILGRM FKLLHFPASA NGIITKANLP RIMDVLVHCS KDIPIVSEKV
301: CGAIYFLARG YEDAESMPSE LSLSLDRVID ALLSASQPSD ETPFRLGASA YEALCAVVRV SNLEQPVVWS AIGDLMHRIM KRLDMTLDRQ ALTLGHKLKK
401: NNLQIVLCGV LQVIVQKLAN SATVKIVTNA AHHLLFSFCR VLVCDSSTAQ SEAMSWFAIA ALANATGPGF GKHMPILMQV LDAHPLSPIS VGVIGDICLA
501: LEGKILPHCD KIMQVLYKGL SKSTLRAPIF SCFGDIALAI SNDFEKYLQY VLEKLQEAAN SQDWADVQEE DKTEYVNQLR QGIYKAYSGI LRGIKDPRIG
601: FKVATHLFKF MEAVWVDRSR DKSVMHAAVA VLTDFDLTIG SWTEEMTKEL HN
101: LFKREKDQEG LVRMLLQHLF NQEEDQDGLV PMPLEHLLMQ EEDQGDDVMQ EEDQGDDVMQ EEDQEGDDCL LNIDIDCVTL LGLIARTIRD AIVPLVMQCI
201: EGNIKEPDWH SRMAAVSAIG FILEGPSVKG LAPLLDLLLD KMEDPNSKVK GTTAWILGRM FKLLHFPASA NGIITKANLP RIMDVLVHCS KDIPIVSEKV
301: CGAIYFLARG YEDAESMPSE LSLSLDRVID ALLSASQPSD ETPFRLGASA YEALCAVVRV SNLEQPVVWS AIGDLMHRIM KRLDMTLDRQ ALTLGHKLKK
401: NNLQIVLCGV LQVIVQKLAN SATVKIVTNA AHHLLFSFCR VLVCDSSTAQ SEAMSWFAIA ALANATGPGF GKHMPILMQV LDAHPLSPIS VGVIGDICLA
501: LEGKILPHCD KIMQVLYKGL SKSTLRAPIF SCFGDIALAI SNDFEKYLQY VLEKLQEAAN SQDWADVQEE DKTEYVNQLR QGIYKAYSGI LRGIKDPRIG
601: FKVATHLFKF MEAVWVDRSR DKSVMHAAVA VLTDFDLTIG SWTEEMTKEL HN
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.