Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G435400.1 | Wheat | cytosol | 97.98 | 60.78 |
| TraesCS2D01G480800.1 | Wheat | cytosol | 80.4 | 44.17 |
| TraesCS2D01G480100.1 | Wheat | cytosol | 75.15 | 40.0 |
| TraesCS2D01G341200.1 | Wheat | cytosol | 57.78 | 32.06 |
| EES19347 | Sorghum | cytosol | 43.03 | 24.48 |
| Zm00001d038021_P001 | Maize | plastid | 43.23 | 24.35 |
| Zm00001d010512_P001 | Maize | plastid | 42.83 | 24.2 |
| TraesCS1D01G224400.2 | Wheat | golgi | 42.42 | 24.19 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 42.22 | 24.08 |
| TraesCS5D01G042900.2 | Wheat | cytosol | 40.2 | 23.61 |
| TraesCS1D01G066600.1 | Wheat | cytosol | 41.41 | 23.35 |
| TraesCS5D01G057000.1 | Wheat | cytosol | 39.39 | 21.98 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 38.38 | 21.79 |
| TraesCS5D01G022500.1 | Wheat | cytosol | 31.11 | 21.69 |
| TraesCS5D01G095100.1 | Wheat | golgi | 37.58 | 21.33 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 37.58 | 21.33 |
| Bra029733.1-P | Field mustard | cytosol | 37.37 | 21.22 |
| CDY44668 | Canola | cytosol | 37.37 | 21.19 |
| CDY53085 | Canola | cytosol | 37.37 | 21.19 |
| CDY28068 | Canola | cytosol | 20.61 | 21.07 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 36.97 | 20.75 |
| PGSC0003DMT400068505 | Potato | cytosol | 35.56 | 20.16 |
| EES13277 | Sorghum | cytosol | 28.08 | 18.96 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 35.76 | 17.68 |
| AT3G08947.1 | Thale cress | cytosol | 21.01 | 15.83 |
| TraesCS3D01G318400.1 | Wheat | cytosol, peroxisome, plastid | 20.61 | 15.64 |
| Bra029635.1-P | Field mustard | cytosol | 4.85 | 9.72 |
| TraesCS2D01G572700.1 | Wheat | cytosol | 14.34 | 7.92 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 |
| GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N |
| InterPro:KPNB1_plant | PFAM:PF03810 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SUPFAM:SSF48371 |
| EnsemblPlantsGene:TraesCS2D01G434400 | EnsemblPlants:TraesCS2D01G434400.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:545727287..545728912
Molecular Weight (calculated)
55661.2 Da
IEP (calculated)
4.565
GRAVY (calculated)
-0.058
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESIDVNDA LTHASNPDNN IRSIGEDMLK RLQNRDLPNF LLYLSSELVR EGIPEESRVL AAITLKNSLD SKDPALKDAH KDLLCLKWLS VDKSIRLEIK
101: NNLLMTLEID SRPSHSRHPS SKVIAEVIAR VACMEIPRNQ WLDLVGKLMD NMASLSSSLK QATLEVLQYI FKAKIPNVVK RDQVDDVIAS VISALNDEVL
201: GSQVLLAALK ALHNIFEFTK FEDHDWRGAI EAVFAVAYRT SGTEIPEAAF EYLVAIASTC HTKFEPDIEV LMCITTQALN GDVESLKVQC IKLWITICEK
301: EIDWLEEEEE EEEEKEDKDE SYFTGPLYSL VPLLLQTYLN EEERDLEQMD IWIISMTCLG LAARILKGGV VPTVMHFVEE NMNGPHKIAA LSPLGFILEG
401: PSVKQLAPLV DLLLALMEYQ AEGVRGRAAW TLGRLFELVG AHRIMRNEVV SLDRIMELLI ERSCDVPQVS IEVHGALYFL ARGYGEDAKS RSKSN
101: NNLLMTLEID SRPSHSRHPS SKVIAEVIAR VACMEIPRNQ WLDLVGKLMD NMASLSSSLK QATLEVLQYI FKAKIPNVVK RDQVDDVIAS VISALNDEVL
201: GSQVLLAALK ALHNIFEFTK FEDHDWRGAI EAVFAVAYRT SGTEIPEAAF EYLVAIASTC HTKFEPDIEV LMCITTQALN GDVESLKVQC IKLWITICEK
301: EIDWLEEEEE EEEEKEDKDE SYFTGPLYSL VPLLLQTYLN EEERDLEQMD IWIISMTCLG LAARILKGGV VPTVMHFVEE NMNGPHKIAA LSPLGFILEG
401: PSVKQLAPLV DLLLALMEYQ AEGVRGRAAW TLGRLFELVG AHRIMRNEVV SLDRIMELLI ERSCDVPQVS IEVHGALYFL ARGYGEDAKS RSKSN
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.