CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13277	Sorghum	cytosol	80.8	95.91
Zm00001d010512_P001	Maize	plastid	95.29	94.63
OQU83489	Sorghum	nucleus	3.45	90.91
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	89.54	89.75
TraesCS1D01G224400.2	Wheat	golgi	88.51	88.71
TraesCS1A01G222800.2	Wheat	golgi, unclear	88.39	88.59
TraesCS1B01G236100.3	Wheat	cytosol	88.51	88.51
HORVU1Hr1G060180.2	Barley	cytosol	87.82	88.02
TraesCS1B01G083800.1	Wheat	cytosol	82.87	82.97
TraesCS1A01G065600.1	Wheat	cytosol	82.87	82.97
TraesCS1D01G066600.1	Wheat	cytosol	82.87	82.12
HORVU1Hr1G013580.2	Barley	cytosol, plastid	82.41	74.38
VIT_08s0058g00270.t01	Wine grape	cytosol	69.89	69.72
PGSC0003DMT400068505	Potato	cytosol	68.39	68.16
Bra029733.1-P	Field mustard	cytosol	67.36	67.2
CDY44668	Canola	cytosol	67.36	67.12
CDY53085	Canola	cytosol	67.24	67.01
AT3G08947.1	Thale cress	cytosol	49.89	66.06
TraesCS1A01G065000.1	Wheat	cytosol	25.06	64.31
EES16185	Sorghum	cytosol	61.84	61.7
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	68.62	59.64
TraesCS7B01G222000.1	Wheat	cytosol	53.68	56.33
TraesCS3D01G318400.1	Wheat	cytosol, peroxisome, plastid	37.13	49.54
TraesCS5D01G042900.2	Wheat	cytosol	46.55	48.04
TraesCS5B01G034200.1	Wheat	cytosol	45.52	47.77
TraesCS5D01G022500.1	Wheat	cytosol	37.47	45.92
TraesCS5D01G057000.1	Wheat	cytosol	45.52	44.64
TraesCS3A01G325000.1	Wheat	cytosol	26.55	44.42
TraesCS5B01G051300.1	Wheat	cytosol	45.06	44.19
TraesCS2D01G434400.1	Wheat	cytosol	24.48	43.03
TraesCS2A01G435400.1	Wheat	cytosol	36.55	39.85
TraesCS2D01G341200.1	Wheat	cytosol	40.69	39.69
TraesCS2B01G362200.1	Wheat	cytosol	31.61	39.51
TraesCS2D01G480800.1	Wheat	cytosol	39.66	38.29
TraesCS2B01G506500.1	Wheat	cytosol	39.77	38.27
TraesCS2D01G480100.1	Wheat	cytosol	39.31	36.77
CDY28068	Canola	cytosol	20.23	36.36
TraesCS2B01G505600.1	Wheat	cytosol	39.08	36.32
Bra029635.1-P	Field mustard	cytosol	8.05	28.34
EES11709	Sorghum	cytosol	19.89	19.46

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	EntrezGene:8061328	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5YWA7
EnsemblPlants:EES19347	ProteinID:EES19347	ProteinID:EES19347.1	GO:GO:0000060	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005635	GO:GO:0005737	GO:GO:0006607	GO:GO:0006610	GO:GO:0006810	GO:GO:0006886
GO:GO:0006913	GO:GO:0008139	GO:GO:0008150	GO:GO:0008536	GO:GO:0008565	GO:GO:0016020
GO:GO:0031965	GO:GO:0034399	InterPro:IPR001494	InterPro:IPR011989	InterPro:Importin-beta_N	InterPro:KPNB1_plant
PFAM:PF03810	PFAM:PF13513	PFscan:PS50166	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913
EnsemblPlantsGene:SORBI_3009G102900	SUPFAM:SSF48371	unigene:Sbi.18176	UniParc:UPI0001A88992	RefSeq:XP_002440917.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:41259648..41265174

Molecular Weight (calculated)

95780.6 Da

IEP (calculated)

4.361

GRAVY (calculated)

-0.009

Length

870 amino acids

Sequence
(BLAST)

001: MDITQVLLAA QSPDANLRTV AESNLTQFQE QNLPNFLLSL SIELSNDEKP PESRRLAGII LKNSLDAKDS AKKELLTQQW VSVDPSVKLK IKELLLVTLG
101: SSVHDARHTS SQVIAKVASI EIPRREWQDL VANLLGNMTS PGASAPLKQA TLEALGYVCE EISPQDLEQD QVNAVLTAVV QGMNQTELSP EVRLAAVKAL
201: YNALDFAESN FANEMERNYI MKVVCETAVS KEVEIRQAAF ECLVAIASTY YSHLDPYMQT IFNLTANAVK GDEEPVALQA VEFWSAICDE EIALQDEYEG
301: SEDGNSTVHF RFIEKALPSL VPMLLETLLK QEEDQDQDDN VWNISMSGGT CLGLISRTVG DAVVPLVMPF VEANITKPDW HCREAATFAF GSILEGPSVE
401: KLAPLVQGGL DFLLNTMNDA NSQVKDTTAW TLGRVFELLH SPAGANPIIN NSNLPRIMSV LLESSKDSPN VAEKVCGAIY FLAQGYEDAE SMSSVLTPYL
501: PNIIAALLSA ADRADTTHFR LRASAYEALN EIVRVSNIPE TSGIIGQLLQ EIMRRLNLTF DLHILSSGDK EKQSDLQALL CGVLQVIIQK LNSTDAKSII
601: SQTADQLMML FLRVFACHNS TVHEEAMLAI GALAYATGPD FVKYMPNFFT YLEAGLQNYE EYQVCSISVG VVGDICRALE DKILPFCDRI MTVLLKDLSS
701: SMLNRSVKPP IFSCFGDIAL AIGENFEKYL PYAMPMLQGA AGLLGTLDRS DDDMVDYGNQ LRRGIFEAYS GILQGIKGPK AQLMIPYATH LLQFTEAVFK
801: DRSRDDSVTK AAVAVIGDLA DTLGQSSKDL FKTHLFHVEF LRECQAQEFD DEVRETAQWA QGMINQAVVS

Best Arabidopsis Sequence Match ( AT5G53480.1 )
(BLAST)

001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV

Arabidopsis Description

KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.