Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 56.69 | 54.15 |
| TraesCS1B01G236100.3 | Wheat | cytosol | 56.45 | 53.79 |
| EES19347 | Sorghum | cytosol | 56.33 | 53.68 |
| TraesCS1B01G083800.1 | Wheat | cytosol | 55.97 | 53.39 |
| Zm00001d038021_P001 | Maize | plastid | 56.21 | 53.01 |
| Zm00001d010512_P001 | Maize | plastid | 54.4 | 51.48 |
| EES13277 | Sorghum | cytosol | 44.03 | 49.8 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 48.73 | 46.33 |
| PGSC0003DMT400068505 | Potato | cytosol | 47.65 | 45.25 |
| Bra029733.1-P | Field mustard | cytosol | 46.8 | 44.5 |
| CDY53085 | Canola | cytosol | 46.8 | 44.44 |
| CDY44668 | Canola | cytosol | 46.8 | 44.44 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 45.84 | 43.58 |
| TraesCS4B01G192500.1 | Wheat | endoplasmic reticulum | 45.48 | 42.74 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 44.87 | 42.66 |
| AT3G08947.1 | Thale cress | cytosol | 33.53 | 42.31 |
| TraesCS5B01G034200.1 | Wheat | cytosol | 40.89 | 40.89 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 48.01 | 39.76 |
| TraesCS5B01G051300.1 | Wheat | cytosol | 41.74 | 39.01 |
| TraesCS2B01G506500.1 | Wheat | cytosol | 35.46 | 32.52 |
| TraesCS2B01G362200.1 | Wheat | cytosol | 26.9 | 32.04 |
| TraesCS2B01G505600.1 | Wheat | cytosol | 35.83 | 31.73 |
| CDY28068 | Canola | cytosol | 17.13 | 29.34 |
| Bra029635.1-P | Field mustard | cytosol | 6.88 | 23.08 |
| TraesCS4B01G307300.1 | Wheat | cytosol | 2.41 | 19.42 |
| TraesCS2B01G624100.1 | Wheat | cytosol | 16.16 | 14.94 |
| TraesCS2B01G426000.1 | Wheat | cytosol | 5.55 | 12.64 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant |
| PFAM:PF03810 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SMART:SM00913 | SUPFAM:SSF48371 |
| EnsemblPlantsGene:TraesCS7B01G222000 | EnsemblPlants:TraesCS7B01G222000.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7B:+:415443180..415445755
Molecular Weight (calculated)
92113.5 Da
IEP (calculated)
5.182
GRAVY (calculated)
0.057
Length
829 amino acids
Sequence
(BLAST)
(BLAST)
001: MDITSTLFAA QSMDLNSRSA AEASLKLFQE QNLSAFLLSL SAELSSDAKP QASRVLAGII LKNTLDSKDS EKKELLIQQW VNLDTSVKMK IKKSLLTTLG
101: SLVAVARHVT SQVIAKVASI EVPRGKCPDD LIGILLVNLK EQAASAPLKQ ATLEVFGYVF QDIHPENLDQ DQASVILTAV VQVASEAHLS SEVRLTAVKV
201: LYSALDFAYS SFAKDRSRSD LMNSIIGTAV SEDKNIRAAS FECLVAIASK YYMHLKPYIS GILKLTARAM EDDKSVALQA IEFWCNICTC EQVEVQETYA
301: EFDDANSVVN YHFIESTFRE LVPMLLGTLL KQEEDKEQKG SVRKVSTSGM VCLGLIARIL GDEVLPHMVK FIDDNIEGPE WYCRRAATFA LVSILVGPSV
401: EELVPMVRKK LDCLLNRMED ADKEEKATIA RTIGQIFEIL HSPASANIII TNKNCHRIMN VLLESSKGYP EVTEEVFRAI YFLAQGYQDE ELLPELAPYI
501: ERAINALISA LDCADKTNFS LRTSAYRALN EIVRVSKIHE NPDIIGKLLY DIMERLNGTF DFPIQSADDV RNQNDLQASL CVLLRIIIHK LSNLVDNSII
601: PVAADNLMLL FFRVFNHRTC GSTVHDKAML ATGALAYAIG QDFEKHMPKL LLNYSEYQLT PVSLGVLGNI CHVLEHQMLT SSVKVMDVFK KALSNPMLDR
701: SVKPAIFSCF GDLALAIGEH FDGYLPTVME MLKEDADLGI DKEDVGYRNQ LRWAICRAYS GILNGFKGPK ARLIEPYLSC MLSFFRKVCD DPISDKSVER
801: AAVPVIHDLQ ATFVSQAQEM LDQLGGSDL
101: SLVAVARHVT SQVIAKVASI EVPRGKCPDD LIGILLVNLK EQAASAPLKQ ATLEVFGYVF QDIHPENLDQ DQASVILTAV VQVASEAHLS SEVRLTAVKV
201: LYSALDFAYS SFAKDRSRSD LMNSIIGTAV SEDKNIRAAS FECLVAIASK YYMHLKPYIS GILKLTARAM EDDKSVALQA IEFWCNICTC EQVEVQETYA
301: EFDDANSVVN YHFIESTFRE LVPMLLGTLL KQEEDKEQKG SVRKVSTSGM VCLGLIARIL GDEVLPHMVK FIDDNIEGPE WYCRRAATFA LVSILVGPSV
401: EELVPMVRKK LDCLLNRMED ADKEEKATIA RTIGQIFEIL HSPASANIII TNKNCHRIMN VLLESSKGYP EVTEEVFRAI YFLAQGYQDE ELLPELAPYI
501: ERAINALISA LDCADKTNFS LRTSAYRALN EIVRVSKIHE NPDIIGKLLY DIMERLNGTF DFPIQSADDV RNQNDLQASL CVLLRIIIHK LSNLVDNSII
601: PVAADNLMLL FFRVFNHRTC GSTVHDKAML ATGALAYAIG QDFEKHMPKL LLNYSEYQLT PVSLGVLGNI CHVLEHQMLT SSVKVMDVFK KALSNPMLDR
701: SVKPAIFSCF GDLALAIGEH FDGYLPTVME MLKEDADLGI DKEDVGYRNQ LRWAICRAYS GILNGFKGPK ARLIEPYLSC MLSFFRKVCD DPISDKSVER
801: AAVPVIHDLQ ATFVSQAQEM LDQLGGSDL
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.