Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G480100.1 | Wheat | cytosol | 96.69 | 97.31 |
| TraesCS2B01G506500.1 | Wheat | cytosol | 75.75 | 78.43 |
| TraesCS2B01G362200.1 | Wheat | cytosol | 43.7 | 58.76 |
| TraesCS5B01G034200.1 | Wheat | cytosol | 37.18 | 41.98 |
| TraesCS1B01G236100.3 | Wheat | cytosol | 36.86 | 39.66 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 36.75 | 39.63 |
| EES19347 | Sorghum | cytosol | 36.32 | 39.08 |
| Zm00001d038021_P001 | Maize | plastid | 36.54 | 38.91 |
| TraesCS1B01G083800.1 | Wheat | cytosol | 36.0 | 38.78 |
| Zm00001d010512_P001 | Maize | plastid | 36.0 | 38.47 |
| TraesCS5B01G051300.1 | Wheat | cytosol | 36.43 | 38.44 |
| EES13277 | Sorghum | cytosol | 28.95 | 36.97 |
| TraesCS7B01G222000.1 | Wheat | cytosol | 31.73 | 35.83 |
| Bra029733.1-P | Field mustard | cytosol | 31.94 | 34.29 |
| CDY53085 | Canola | cytosol | 31.94 | 34.25 |
| CDY44668 | Canola | cytosol | 31.94 | 34.25 |
| TraesCS4B01G192500.1 | Wheat | endoplasmic reticulum | 32.05 | 34.01 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 30.98 | 33.26 |
| TraesCS5B01G088400.1 | Wheat | cytosol | 30.98 | 33.26 |
| PGSC0003DMT400068505 | Potato | cytosol | 30.98 | 33.22 |
| AT3G08947.1 | Thale cress | cytosol | 23.18 | 33.03 |
| TraesCS5B01G088700.1 | Wheat | cytosol | 30.66 | 32.91 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 31.09 | 29.07 |
| CDY28068 | Canola | cytosol | 13.89 | 26.86 |
| Bra029635.1-P | Field mustard | cytosol | 5.88 | 22.27 |
| TraesCS4B01G307300.1 | Wheat | cytosol | 1.71 | 15.53 |
| TraesCS2B01G624100.1 | Wheat | cytosol | 13.89 | 14.49 |
| TraesCS2B01G426000.1 | Wheat | cytosol | 5.45 | 14.01 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 |
| GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 | InterPro:HEAT_type_2 | InterPro:IPR001494 | InterPro:IPR011989 |
| InterPro:IPR021133 | InterPro:Importin-beta_N | InterPro:KPNB1_plant | PFAM:PF03810 | PFscan:PS50077 | PFscan:PS50166 |
| PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2B01G505600 | EnsemblPlants:TraesCS2B01G505600.1 | SEG:seg |
Description
No Description!
Coordinates
chr2B:+:700205793..700208693
Molecular Weight (calculated)
103310.0 Da
IEP (calculated)
4.642
GRAVY (calculated)
-0.101
Length
936 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESIDMSDA LAHASNPDDN IRSIGEGMLK RLHNLDLPNF LLRLSSELLR EGSPEECRAL AAITLKNSLD SKDPALKGAH EDLLSLNWLN LHPSIRSEIK
101: TNLLMTLESD SRQSHSRCPS SKVIAKVIAR VACMEIPRNQ WLDLVGKLVD NMASSSSSLK QATLEVLEYI FEEKIPKVLK GNQLDDVMAC VINALKNQVL
201: SSEVHLAALK VLLNILELAK FKGHAWRNSI VAVCDVAVVT VCDVAGGRGE SGAEIKEAAF ECLVAMASTC HTKLEPYKEI MLSLTSQALE GDVESVKVQC
301: IKLWMTICQE EINWEEEEEE GEEEEEEEEE EEEEEEEGAS SFIDTLCSFV PLLLHTYLNE EGDLKQGDIW KQEDEGDGDI SMTAEQEEGD GDISMTAEQE
401: EEGDENVEQE GVNLEGIWEQ EEDETLQGIS MTCLGLAARI MKGGIVPLVM HFVVENMNGP HKVAALSPLG FILEGPSVKQ LAPVVDLLLT MMEDGEEGVR
501: GKAAWSLGRL FELVGANRIM RNKVVTLDGI MRVLIEGSKD VPQVSTEVHG ALCFLARSYG EDAKSKSNLS QLSPFVPPVI DALICASDLA RETPYRLLAC
601: PYKALSEIVR VSHVQDLQVC RALIGLMSHI MRRLNTVLHG HGAISSLKRK NQLEVLLCGL LNVLIHKLGS SKKFTLKWSA KCVLLLLCPL LTRDSTSARD
701: GAALAIGALA HAIGGDFGQH MPMLLQYFSV KRLFPVYLEV MCDICQVLGK KGKKEEVVPS FDHIMDVLCQ GMTELTLQPP ILSSIGQIAL ALGEKFEKYL
801: PLVMEKLLVV EKLAQLKSED KDEDHSTKVR EGIFEAYYGI IGGITDPRSG FKVGLALLDF SEQERKRRDR DGRTLTAGVH ALSQLPPRVE VWSEGFIRLM
901: QEASIYGRVQ VTEGQQKASI YGRVQVTEGQ QSGGLR
101: TNLLMTLESD SRQSHSRCPS SKVIAKVIAR VACMEIPRNQ WLDLVGKLVD NMASSSSSLK QATLEVLEYI FEEKIPKVLK GNQLDDVMAC VINALKNQVL
201: SSEVHLAALK VLLNILELAK FKGHAWRNSI VAVCDVAVVT VCDVAGGRGE SGAEIKEAAF ECLVAMASTC HTKLEPYKEI MLSLTSQALE GDVESVKVQC
301: IKLWMTICQE EINWEEEEEE GEEEEEEEEE EEEEEEEGAS SFIDTLCSFV PLLLHTYLNE EGDLKQGDIW KQEDEGDGDI SMTAEQEEGD GDISMTAEQE
401: EEGDENVEQE GVNLEGIWEQ EEDETLQGIS MTCLGLAARI MKGGIVPLVM HFVVENMNGP HKVAALSPLG FILEGPSVKQ LAPVVDLLLT MMEDGEEGVR
501: GKAAWSLGRL FELVGANRIM RNKVVTLDGI MRVLIEGSKD VPQVSTEVHG ALCFLARSYG EDAKSKSNLS QLSPFVPPVI DALICASDLA RETPYRLLAC
601: PYKALSEIVR VSHVQDLQVC RALIGLMSHI MRRLNTVLHG HGAISSLKRK NQLEVLLCGL LNVLIHKLGS SKKFTLKWSA KCVLLLLCPL LTRDSTSARD
701: GAALAIGALA HAIGGDFGQH MPMLLQYFSV KRLFPVYLEV MCDICQVLGK KGKKEEVVPS FDHIMDVLCQ GMTELTLQPP ILSSIGQIAL ALGEKFEKYL
801: PLVMEKLLVV EKLAQLKSED KDEDHSTKVR EGIFEAYYGI IGGITDPRSG FKVGLALLDF SEQERKRRDR DGRTLTAGVH ALSQLPPRVE VWSEGFIRLM
901: QEASIYGRVQ VTEGQQKASI YGRVQVTEGQ QSGGLR
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.