Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G506500.1 | Wheat | cytosol | 98.22 | 97.9 |
| TraesCS2D01G434400.1 | Wheat | cytosol | 44.17 | 80.4 |
| TraesCS2D01G480100.1 | Wheat | cytosol | 76.91 | 74.52 |
| TraesCS2D01G341200.1 | Wheat | cytosol | 57.49 | 58.07 |
| TraesCS5D01G022500.1 | Wheat | cytosol | 33.85 | 42.96 |
| TraesCS5D01G042900.2 | Wheat | cytosol | 39.84 | 42.59 |
| EES19347 | Sorghum | cytosol | 38.29 | 39.66 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 38.07 | 39.52 |
| Zm00001d038021_P001 | Maize | plastid | 38.4 | 39.36 |
| TraesCS1D01G224400.2 | Wheat | golgi | 37.74 | 39.17 |
| TraesCS5D01G057000.1 | Wheat | cytosol | 38.51 | 39.12 |
| TraesCS1D01G066600.1 | Wheat | cytosol | 37.96 | 38.95 |
| Zm00001d010512_P001 | Maize | plastid | 37.62 | 38.7 |
| TraesCS3D01G318400.1 | Wheat | cytosol, peroxisome, plastid | 27.64 | 38.19 |
| EES13277 | Sorghum | cytosol | 30.08 | 36.97 |
| Bra029733.1-P | Field mustard | cytosol | 34.07 | 35.21 |
| CDY53085 | Canola | cytosol | 34.07 | 35.17 |
| CDY44668 | Canola | cytosol | 34.07 | 35.17 |
| TraesCS4D01G193700.1 | Wheat | endoplasmic reticulum | 33.52 | 34.24 |
| TraesCS5D01G094600.1 | Wheat | cytosol | 32.85 | 33.95 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 32.63 | 33.72 |
| TraesCS5D01G095100.1 | Wheat | golgi | 32.52 | 33.6 |
| AT3G08947.1 | Thale cress | cytosol | 24.31 | 33.33 |
| PGSC0003DMT400068505 | Potato | cytosol | 32.3 | 33.33 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 32.41 | 29.17 |
| CDY28068 | Canola | cytosol | 13.87 | 25.83 |
| Bra029635.1-P | Field mustard | cytosol | 5.77 | 21.05 |
| TraesCS2D01G572700.1 | Wheat | cytosol | 14.54 | 14.6 |
Protein Annotations
| MapMan:35.1 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 |
| GO:GO:0008565 | InterPro:IPR001494 | InterPro:Importin-beta_N | InterPro:KPNB1_plant | PFAM:PF03810 | PFscan:PS50166 |
| PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2D01G480800 | EnsemblPlants:TraesCS2D01G480800.1 | SEG:seg |
Description
No Description!
Coordinates
chr2D:+:584234836..584237627
Molecular Weight (calculated)
100105.0 Da
IEP (calculated)
5.059
GRAVY (calculated)
-0.126
Length
901 amino acids
Sequence
(BLAST)
(BLAST)
001: MDESIDVSDA LAHASHPDNN IRSIGEDMLK RLQNLDLPNF LLYLSSELLR EGIPEESRAL AAITLKNSLD SKDPALKDAH KDLLCIKWLS LDPSIRSEIK
101: NKLLMTLEFD SRQSHSRHPS SKVIAKVIAR VACMEIPRNQ WLDLVGKLVD NMASSSSSLK QATLEVLQYI FEAKIPKVVK GDQVDVVMGS VISALNNQML
201: DSQVHLTALK ALLNILEFTK FEDHAWRNSV VAVCEVAGRI NSGAEIKEAA FECLVAIAHT CHTILEPYKE IMMSLTSQAL EGDVESLKFQ CIKLWITVFQ
301: EEIGWEEEEE EEEEEEEKEK EDDDEEEASS FIGPLCSFVP LLLQTYLNKE QGDLKQEDIW KQGDEGDISM TGEQEEEGDE NVEQEGVNLE DILEQDEEED
401: ETLQGISMTC LGLAARIMKG GVVPLVMHFV KENLNGPHKI AALSPLGFIL EGPSVKQLAP LVHLLLVLMD HPEEGVRGRA AWTLGRLFKL VGAHRIVRNE
501: VVVLDRIMKL LIERSKDVPE VSVEVHGALY FLARGYAEDA KSRSKSNSCE LSPSVKPLID ALLCASDLAR ETPFCLLPSP YKALSEIVRV SDTGDLQVRR
601: AVIGLMSHIM RRFNIVLNGH GAVSSVQRKN QLEVLLCGLV EVLIHKLGST LKGSAKCVLM LLCPLLTRES TSARNGAALA IGALAHAIGA DFGQHMPTVL
701: QYFSVKRLSP LYLEVICDIC HVLGKEGKEE EVVPCFDHIM EVLYQGMGES TLQPPILSSI GQIALAIGEK FEKYLPPVME KLIVMEKVAQ LDQDPLGDHS
801: NKVREAISKA YHGILGGITD PKSGFKVGMA LLDFTEKERK RRDSDRRSRR TRTMTARDTR TMKALVDALS QLSPRVGVWS EALIRSVHEA NTPSLNKYKS
901: V
101: NKLLMTLEFD SRQSHSRHPS SKVIAKVIAR VACMEIPRNQ WLDLVGKLVD NMASSSSSLK QATLEVLQYI FEAKIPKVVK GDQVDVVMGS VISALNNQML
201: DSQVHLTALK ALLNILEFTK FEDHAWRNSV VAVCEVAGRI NSGAEIKEAA FECLVAIAHT CHTILEPYKE IMMSLTSQAL EGDVESLKFQ CIKLWITVFQ
301: EEIGWEEEEE EEEEEEEKEK EDDDEEEASS FIGPLCSFVP LLLQTYLNKE QGDLKQEDIW KQGDEGDISM TGEQEEEGDE NVEQEGVNLE DILEQDEEED
401: ETLQGISMTC LGLAARIMKG GVVPLVMHFV KENLNGPHKI AALSPLGFIL EGPSVKQLAP LVHLLLVLMD HPEEGVRGRA AWTLGRLFKL VGAHRIVRNE
501: VVVLDRIMKL LIERSKDVPE VSVEVHGALY FLARGYAEDA KSRSKSNSCE LSPSVKPLID ALLCASDLAR ETPFCLLPSP YKALSEIVRV SDTGDLQVRR
601: AVIGLMSHIM RRFNIVLNGH GAVSSVQRKN QLEVLLCGLV EVLIHKLGST LKGSAKCVLM LLCPLLTRES TSARNGAALA IGALAHAIGA DFGQHMPTVL
701: QYFSVKRLSP LYLEVICDIC HVLGKEGKEE EVVPCFDHIM EVLYQGMGES TLQPPILSSI GQIALAIGEK FEKYLPPVME KLIVMEKVAQ LDQDPLGDHS
801: NKVREAISKA YHGILGGITD PKSGFKVGMA LLDFTEKERK RRDSDRRSRR TRTMTARDTR TMKALVDALS QLSPRVGVWS EALIRSVHEA NTPSLNKYKS
901: V
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.