Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G224400.2 | Wheat | golgi | 98.73 | 98.73 |
| TraesCS1A01G222800.2 | Wheat | golgi, unclear | 98.62 | 98.62 |
| TraesCS1B01G236100.3 | Wheat | cytosol | 98.73 | 98.51 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 90.78 | 90.78 |
| EES19347 | Sorghum | cytosol | 88.02 | 87.82 |
| Zm00001d038021_P001 | Maize | plastid | 88.36 | 87.26 |
| EES13277 | Sorghum | cytosol | 73.5 | 87.04 |
| Zm00001d010512_P001 | Maize | plastid | 85.83 | 85.05 |
| HORVU1Hr1G013580.2 | Barley | cytosol, plastid | 85.48 | 76.97 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 70.16 | 69.84 |
| PGSC0003DMT400068505 | Potato | cytosol | 68.2 | 67.81 |
| Bra029733.1-P | Field mustard | cytosol | 67.28 | 66.97 |
| CDY44668 | Canola | cytosol | 67.28 | 66.9 |
| CDY53085 | Canola | cytosol | 67.17 | 66.78 |
| AT3G08947.1 | Thale cress | cytosol | 49.54 | 65.45 |
| HORVU5Hr1G021580.1 | Barley | cytosol | 62.33 | 62.04 |
| HORVU5Hr1G021530.2 | Barley | cytosol | 62.21 | 61.43 |
| HORVU4Hr1G055910.2 | Barley | cytosol, plastid | 67.17 | 60.29 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 68.55 | 59.44 |
| CDY28068 | Canola | cytosol | 20.05 | 35.95 |
| Bra029635.1-P | Field mustard | cytosol | 8.18 | 28.74 |
| HORVU2Hr1G126610.7 | Barley | cytosol | 18.89 | 18.55 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008536 | GO:GO:0008565 |
| EnsemblPlantsGene:HORVU1Hr1G060180 | EnsemblPlants:HORVU1Hr1G060180.2 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant |
| UniProt:M0XEJ4 | PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 |
| SMART:SM00913 | SUPFAM:SSF48371 | UniParc:UPI0001D646EC | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr1H:-:437443399..437450534
Molecular Weight (calculated)
95709.7 Da
IEP (calculated)
4.289
GRAVY (calculated)
0.007
Length
868 amino acids
Sequence
(BLAST)
(BLAST)
001: MDITQILLAA QSPDGNLRSA AEANIKQFQE QNLPNFLLSL SVELSNDERP PESRRLAGII LKNSLDAKDS ARKELLIQQW VSLDHSIKSQ IKESLLITLG
101: SSVGDARQTS SQVIAKIASI EIPRREWQDL IAKLLSNMTQ PGASAPLKQA TLEALGYVCE EIPPEHLEQD QVNAVLTAVV QGMNQTELSS EVRLAAVKAL
201: YNALDFAESN FANEMERTFI MKVICDTAVS KEVEIRQAAF ECLVAIASTY YVHLDPYMQT IFNLTANAVK GDEEPVALQA VEFWSTICEE EIELQEEYEG
301: SDDANSTVNY RFIEKALPSL VPMLLETLLK QEEDQEQDDN AWNISMSGGT CLGLIARTVG DAIVPLVMPF VEANITKPDW RCREAATFAF GSILDGPSLE
401: KLAPLVQAGL DFLLNTMNDP NSQVKDTTAW TLGRVFELLH SPCSTNPIIS NANLPRIMAV LLESSKDVPN VAEKVCGAIY FLAQGYEDAE PVSSLLTPYL
501: PNVIAALLTA ADRSDMTHVR LRASAYEALN EIVRVSNIPE TSSIIGQLLQ EIMRRLNLTF DHQIFSSGDK EKQSDLQALL CGVLQVIIQK LNSSDAKSII
601: AQTADQLMLL FLRVFACHSA TVHEEAMLAI GALAYATGPD FEKYMPEFLK YLEAGLQNYE EYQVCSISVG VVGDICRALE DKILPFCDGI MTVLLKDLSN
701: SQLNRSVKPP IFSCFGDIAL AIGENFEKYL PYAMPMLQGA AELLVVLDQN DEDMVDYGNQ LRRGIFEAYS GILQGLKGAK AQLMIPYAGH LLQFTEAVYK
801: DGSRDESVTK AAVAVLGDLA DTLGPISKDL FKSHLFHVEF LRECLDLDDE VRETASWTQG MINQAIVS
101: SSVGDARQTS SQVIAKIASI EIPRREWQDL IAKLLSNMTQ PGASAPLKQA TLEALGYVCE EIPPEHLEQD QVNAVLTAVV QGMNQTELSS EVRLAAVKAL
201: YNALDFAESN FANEMERTFI MKVICDTAVS KEVEIRQAAF ECLVAIASTY YVHLDPYMQT IFNLTANAVK GDEEPVALQA VEFWSTICEE EIELQEEYEG
301: SDDANSTVNY RFIEKALPSL VPMLLETLLK QEEDQEQDDN AWNISMSGGT CLGLIARTVG DAIVPLVMPF VEANITKPDW RCREAATFAF GSILDGPSLE
401: KLAPLVQAGL DFLLNTMNDP NSQVKDTTAW TLGRVFELLH SPCSTNPIIS NANLPRIMAV LLESSKDVPN VAEKVCGAIY FLAQGYEDAE PVSSLLTPYL
501: PNVIAALLTA ADRSDMTHVR LRASAYEALN EIVRVSNIPE TSSIIGQLLQ EIMRRLNLTF DHQIFSSGDK EKQSDLQALL CGVLQVIIQK LNSSDAKSII
601: AQTADQLMLL FLRVFACHSA TVHEEAMLAI GALAYATGPD FEKYMPEFLK YLEAGLQNYE EYQVCSISVG VVGDICRALE DKILPFCDGI MTVLLKDLSN
701: SQLNRSVKPP IFSCFGDIAL AIGENFEKYL PYAMPMLQGA AELLVVLDQN DEDMVDYGNQ LRRGIFEAYS GILQGLKGAK AQLMIPYAGH LLQFTEAVYK
801: DGSRDESVTK AAVAVLGDLA DTLGPISKDL FKSHLFHVEF LRECLDLDDE VRETASWTQG MINQAIVS
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.