Factsheet for HORVU1Hr1G013580.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G083800.1	Wheat	cytosol	86.0	95.4
TraesCS1A01G065600.1	Wheat	cytosol	85.89	95.28
TraesCS1D01G066600.1	Wheat	cytosol	86.62	95.1
Os05t0353400-01	Rice	cytosol, plasma membrane, plastid	77.07	85.6
HORVU1Hr1G060180.2	Barley	cytosol	76.97	85.48
EES19347	Sorghum	cytosol	74.38	82.41
EES13277	Sorghum	cytosol	62.45	82.13
Zm00001d038021_P001	Maize	plastid	74.79	82.03
Zm00001d010512_P001	Maize	plastid	73.55	80.94
VIT_08s0058g00270.t01	Wine grape	cytosol	59.85	66.17
PGSC0003DMT400068505	Potato	cytosol	58.92	65.06
Bra029733.1-P	Field mustard	cytosol	58.4	64.56
CDY44668	Canola	cytosol	58.4	64.49
CDY53085	Canola	cytosol	58.3	64.38
AT3G08947.1	Thale cress	cytosol	43.46	63.77
HORVU4Hr1G055910.2	Barley	cytosol, plastid	60.17	59.98
HORVU5Hr1G021580.1	Barley	cytosol	53.32	58.95
HORVU5Hr1G021530.2	Barley	cytosol	53.32	58.48
Solyc09g005010.2.1	Tomato	endoplasmic reticulum	60.06	57.84
CDY28068	Canola	cytosol	17.22	34.3
Bra029635.1-P	Field mustard	cytosol	6.74	26.32
HORVU2Hr1G126610.7	Barley	cytosol	17.12	18.67

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	UniProt:A0A287ENY4	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006810	GO:GO:0006886	GO:GO:0006913	GO:GO:0008150	GO:GO:0008536
GO:GO:0008565	EnsemblPlantsGene:HORVU1Hr1G013580	EnsemblPlants:HORVU1Hr1G013580.2	InterPro:IPR001494	InterPro:IPR011989	InterPro:Importin-beta_N
InterPro:KPNB1_plant	PFAM:PF03810	PFAM:PF13513	PFscan:PS50166	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44
SMART:SM00913	SUPFAM:SSF48371	UniParc:UPI000B47E426	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:+:36169129..36172857

Molecular Weight (calculated)

106291.0 Da

IEP (calculated)

4.864

GRAVY (calculated)

-0.137

Length

964 amino acids

Sequence
(BLAST)

001: HIGGNRAPKQ TPRPKSPNPN RPTTRPGGAA APQPTGGNRT QRRKLQGRQR RPAEYRGRRH TVAEKRVRER PRSSERGPQR DSRRTGTVKG NWNTAMDITQ
101: ILLAAQSPDG NLRSVAEGSL KLFQEQNLPR FLLSLSVELS NDERPPESRR LAGIILKNLL DAKDCSRKEL LAQQWVSLDL SIKSRIKESL LLTLGSSVPD
201: ARQASSQVIA KVASIEMPRR EWQDLIAKLL GNMTQQGASA PLKQATLEAL GYVCEEISPE HLEQDQVNAV LTAVVQGMNQ TELSVEVRLS AVKALYNALY
301: FADSNFANEM ERNYILKVIC ETAVSNEVEI RQAAFECLVA IASIYYMHLE PYMQTVFNLT SNTVKGDEES VALQAIEFWS TICDEEIQLQ EEYEGYDDAN
401: SSANFRFIEK ALSSLVPMLL ETLLKQEEDE EQDDNVWNIS MSGGTCLGLI AKAVGDAIVP LVMPFVEANI TNPDWHCREA ATFAFGSILD GPSLPKLAPL
501: VHAGLNFLLN AMKDPNSQVK GTTAWTLGRV FEFLHSPTSG NPIVTSGNLT RIMTVLLESS KDVPNVAEKV CGAIYFLAQG YENTVDSVSS VLTPYLPSVI
601: TALLSASDCA DTAHFRLRSS AYEALNEIVR VTNIDETSSI IGQLLQEVMR RLNLTFDLEI FSSGDKENQS DLQALLCGVL QVIVPKLSNS DAESIITQNA
701: DQLMFLFLRV FACHSSTVHE EAMLAIGVLA DAIGPDFVKY MPEFFKYLEA GLHNHEEYQV CSISVGVVGD ICRTLEDKVL PFCDGIMTVL LKDLSNPTLN
801: RSVKPPIFSC FGDIALAIGG NFEKYLPYAI PMLQGAAELV AVLDQSDDDM VHYGNQLRRG IFEAYSGILQ GIKGPKAQLM VPCATHLLQF TEAVYKDGSR
901: DESVTKAAVA VLGDLADTLG PVSKDLFRSH LFHVEFFREC LDSDEEVRET ASWAQGMINQ AVVA

Best Arabidopsis Sequence Match ( AT3G08947.1 )
(BLAST)

001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.