Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G066600.1 | Wheat | cytosol | 98.04 | 97.04 |
| TraesCS1B01G083800.1 | Wheat | cytosol | 96.55 | 96.55 |
| HORVU1Hr1G013580.2 | Barley | cytosol, plastid | 95.28 | 85.89 |
| TraesCS1A01G222800.2 | Wheat | golgi, unclear | 85.39 | 85.48 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 85.04 | 85.14 |
| EES19347 | Sorghum | cytosol | 82.97 | 82.87 |
| EES13277 | Sorghum | cytosol | 69.62 | 82.54 |
| Zm00001d038021_P001 | Maize | plastid | 83.31 | 82.37 |
| Zm00001d010512_P001 | Maize | plastid | 81.36 | 80.71 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 66.74 | 66.51 |
| TraesCS1A01G065000.1 | Wheat | cytosol | 25.66 | 65.78 |
| PGSC0003DMT400068505 | Potato | cytosol | 66.05 | 65.75 |
| TraesCS4A01G111400.1 | Wheat | endoplasmic reticulum | 66.4 | 65.42 |
| Bra029733.1-P | Field mustard | cytosol | 65.13 | 64.91 |
| CDY44668 | Canola | cytosol | 65.13 | 64.83 |
| CDY53085 | Canola | cytosol | 65.02 | 64.72 |
| AT3G08947.1 | Thale cress | cytosol | 48.45 | 64.08 |
| TraesCS5A01G077200.1 | Wheat | golgi | 60.41 | 60.21 |
| TraesCS5A01G082600.1 | Wheat | golgi | 59.95 | 59.75 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 66.28 | 57.54 |
| TraesCS3A01G325000.1 | Wheat | cytosol | 26.35 | 44.04 |
| TraesCS2A01G435400.1 | Wheat | cytosol | 35.67 | 38.85 |
| CDY28068 | Canola | cytosol | 19.1 | 34.3 |
| Bra029635.1-P | Field mustard | cytosol | 7.13 | 25.1 |
| TraesCS2A01G562500.1 | Wheat | golgi | 18.99 | 18.39 |
| TraesCS3A01G329100.1 | Wheat | cytosol, mitochondrion | 12.54 | 11.11 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:23.5.1.2.1 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006913 | GO:GO:0008150 |
| GO:GO:0008536 | GO:GO:0008565 | InterPro:IPR001494 | InterPro:IPR011989 | InterPro:Importin-beta_N | InterPro:KPNB1_plant |
| PFAM:PF03810 | PFAM:PF13513 | PFscan:PS50166 | PANTHER:PTHR10527 | PANTHER:PTHR10527:SF44 | SMART:SM00913 |
| SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS1A01G065600 | EnsemblPlants:TraesCS1A01G065600.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1A:-:47823989..47826763
Molecular Weight (calculated)
95724.8 Da
IEP (calculated)
4.330
GRAVY (calculated)
0.062
Length
869 amino acids
Sequence
(BLAST)
(BLAST)
001: MDITQILLAA QSPDGNLRSV AESSLKLFQE QNLPRFLLSL SVELSNDGRP PESRRLAGII LKNSLDAKDC SRKELLGQQW VSLDLSIKSR IKESLLLTLG
101: SSVPDARQVS SQVIAKVASI EMPRREWPDL IAKLLGNMTQ QGASAPLKQA TLEALGYVCE EISPEHLEQD QVNAVLTAVV QGMNQAELSV EVRLAAVKAL
201: YNALYFADSN FANDMERNYI VKVICETAVS NGVEIRQAAF ECLVAIASIY YMHLEPYMQT VFNLTSNAVK GDEESVALQA IEFWSTICDE EIQLQEEYEG
301: YDNADSSANF RFIEKALPSL VPMLLETLLK QEEEQEQDDN VWNISMSSGT CLGLIAKAVG DAIVPLVMPF VEANITNPDW HCREAATFAF GSILDGPSLS
401: KLAPLVHAGL DFLLNAMKDP NSQVKDTTAW TLGRVFEFLH SPTSVNPIVT SGNLMRIMTV LLESSKDAPN VAEKVCGAIY FLAQGYENTA DSVSSVLTPY
501: LPSVITTLLS ASDCADTTHF RLRSSAYEAL NEIVRVSNID ETSSIIGQLL LEVMRRLKLT FDLEIFSSGD KENQSDLQAL LCGVLQVIVP KLSNSDAEPI
601: ITQNADQLMF LFLRVFACHG STVHEEAMLA IGVLADAIGP DFVKYMPEFF KYLEAGLQNH EEYQVCSISV GVVGDICRTL EDKVLPFCDG IMTVLLKDLS
701: NPMLNRSVKP PIFSCFGDIA LAIGENFEKY LPYAMPMLQG AAELLVVLDQ SDDDMVHYGN QLRRGIFEAY SGILQGIKGP KAQLMVPYAT HLLQFTEAVY
801: KDGSRDESVT KAAVAVLGDL ADTLGPISKD LFRNHLFHVE FFRECLDSDE EVRETASWAQ GMINQAVVA
101: SSVPDARQVS SQVIAKVASI EMPRREWPDL IAKLLGNMTQ QGASAPLKQA TLEALGYVCE EISPEHLEQD QVNAVLTAVV QGMNQAELSV EVRLAAVKAL
201: YNALYFADSN FANDMERNYI VKVICETAVS NGVEIRQAAF ECLVAIASIY YMHLEPYMQT VFNLTSNAVK GDEESVALQA IEFWSTICDE EIQLQEEYEG
301: YDNADSSANF RFIEKALPSL VPMLLETLLK QEEEQEQDDN VWNISMSSGT CLGLIAKAVG DAIVPLVMPF VEANITNPDW HCREAATFAF GSILDGPSLS
401: KLAPLVHAGL DFLLNAMKDP NSQVKDTTAW TLGRVFEFLH SPTSVNPIVT SGNLMRIMTV LLESSKDAPN VAEKVCGAIY FLAQGYENTA DSVSSVLTPY
501: LPSVITTLLS ASDCADTTHF RLRSSAYEAL NEIVRVSNID ETSSIIGQLL LEVMRRLKLT FDLEIFSSGD KENQSDLQAL LCGVLQVIVP KLSNSDAEPI
601: ITQNADQLMF LFLRVFACHG STVHEEAMLA IGVLADAIGP DFVKYMPEFF KYLEAGLQNH EEYQVCSISV GVVGDICRTL EDKVLPFCDG IMTVLLKDLS
701: NPMLNRSVKP PIFSCFGDIA LAIGENFEKY LPYAMPMLQG AAELLVVLDQ SDDDMVHYGN QLRRGIFEAY SGILQGIKGP KAQLMVPYAT HLLQFTEAVY
801: KDGSRDESVT KAAVAVLGDL ADTLGPISKD LFRNHLFHVE FFRECLDSDE EVRETASWAQ GMINQAVVA
001: MERNYIMKMV CETACSKEAE IRQAAFECLV SIASTYYEVL EHYIQTLFEL TSNAVKGDEE SVSLQAIEFW SSICDEEIDR QEYDSPASGD SSPPHSSFIE
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
101: KALPHLVQML LETLLKQEED QDHDDDVWNI SMAGGTCLGL VARTVGDHVV PLVMPFVEKN ISSPDWRCRE AATYAFGSIL EGPTIDKLAP MVAAGLEFLL
201: NATKDQNNHV RDTTAWTLSR IFEFLHSPDS GFSVISPENL PRIVSVLLES IKDVPNVAEK VCGAIYNLAQ GYEDSGASSS LLSPYLTEII THLLAAAERT
301: DGAESKLRGA AYETLNEVVR CSNLSEASSI IAHLLPAIMK KLAETMDLPI ISTDDREKQA EVQASLCGVL QVIIQKLSGR EDTKPIIMQS ADDIMRLFLR
401: VFGCHSSSVH EEAMLAIGAL AYATGAEFVK YMPELFKYLQ MGLQNFEEYQ VCSITVGVLG DICRALDEKI LPFCDQIMGL LIQNLQSGAL HRSVKPPIFS
501: CFGDIALAIG AHFERYVAPA VQIMQGAAQV CAQMDTLDEE LMDYANQLRR SIFEAYSGIL QGFKDTKAEL MMPYAQHLLQ FVELVSKDPL RDESVTKAAV
601: AAMGDLADVV GENTKQLFQN FTFFGEFLNE CLESEDEDLK VTARWTQGMI ARLMHPS
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WML1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.