Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G318400.1 | Wheat | cytosol, peroxisome, plastid | 59.23 | 47.24 |
| EES13277 | Sorghum | cytosol | 44.23 | 31.38 |
| TraesCS1A01G222800.2 | Wheat | golgi, unclear | 44.62 | 26.73 |
| Os05t0353400-01 | Rice | cytosol, plasma membrane, plastid | 44.62 | 26.73 |
| EES19347 | Sorghum | cytosol | 44.42 | 26.55 |
| Zm00001d038021_P001 | Maize | plastid | 44.81 | 26.51 |
| TraesCS1A01G065600.1 | Wheat | cytosol | 44.04 | 26.35 |
| Zm00001d010512_P001 | Maize | plastid | 43.46 | 25.8 |
| VIT_08s0058g00270.t01 | Wine grape | cytosol | 39.04 | 23.28 |
| AT3G08947.1 | Thale cress | cytosol | 29.23 | 23.14 |
| PGSC0003DMT400068505 | Potato | cytosol | 38.27 | 22.8 |
| CDY53085 | Canola | cytosol | 38.08 | 22.68 |
| TraesCS4A01G111400.1 | Wheat | endoplasmic reticulum | 38.46 | 22.68 |
| Bra029733.1-P | Field mustard | cytosol | 37.69 | 22.48 |
| CDY44668 | Canola | cytosol | 37.69 | 22.45 |
| TraesCS5A01G082600.1 | Wheat | golgi | 34.23 | 20.41 |
| TraesCS5A01G077200.1 | Wheat | golgi | 33.85 | 20.18 |
| Solyc09g005010.2.1 | Tomato | endoplasmic reticulum | 38.27 | 19.88 |
| TraesCS1A01G065000.1 | Wheat | cytosol | 12.31 | 18.88 |
| TraesCS2A01G435400.1 | Wheat | cytosol | 28.65 | 18.67 |
| CDY28068 | Canola | cytosol | 11.54 | 12.4 |
| Bra029635.1-P | Field mustard | cytosol | 5.58 | 11.74 |
| TraesCS2A01G562500.1 | Wheat | golgi | 11.73 | 6.8 |
| TraesCS3A01G329100.1 | Wheat | cytosol, mitochondrion | 7.88 | 4.18 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G325000.1 | EnsemblPlantsGene:TraesCS3A01G325000 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006810 | GO:GO:0006913 | GO:GO:0008150 | GO:GO:0008565 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:IPR000225 | InterPro:IPR011989 | InterPro:KPNB1_plant | PANTHER:PTHR10527 |
| PANTHER:PTHR10527:SF44 | PFscan:PS50176 | SEG:seg | SUPFAM:SSF48371 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3A:+:569625671..569628164
Molecular Weight (calculated)
57772.1 Da
IEP (calculated)
8.691
GRAVY (calculated)
0.145
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQQGASPPL RQATLAALGY VCEEIGLEQQ QANGVLNAVV QAMNQAEPST EVCLAAVKAL YNLLGCAAAN FANEDVRNHI MGAVCETLAK FEDLEIQQAI
101: FECLAKIAST YYMLLQPYLR TILSLTESIA PQCVVFRCTV CPRVTSSSAA KAFVQAGERS SICSCKRKIK EMLCFRCFLL NLNQASNLLD LSKRQDGRSK
201: QRGYEDAESI PSELSSSLDR VIDALLSTSQ PSDETPFRLG ASAYEALRAV VRVSNLEQAV VWSAIGDLMH CIMKRLDMTL DRQALTLGHK LKKNNLQIVL
301: CGVLQVIVQR LANSATVKIV TNAAHHLLFS FCRVLVCDSS TAQSEAMCWF AIAALANATG PEFGKHMPIL MQVKCCHTVI KLCKFCTKVL LSRLLELQFS
401: HASETLLLLL AMILRSACSM FWKSFKKLLT HRTGLMFKKR TRLNMWLRQG ICKAYSGILR GMKDPRIGFK VATHLFKFME GVWADRSRDK SVMHAAVAVL
501: TDFDLTIGSW TEEMTKELHN
101: FECLAKIAST YYMLLQPYLR TILSLTESIA PQCVVFRCTV CPRVTSSSAA KAFVQAGERS SICSCKRKIK EMLCFRCFLL NLNQASNLLD LSKRQDGRSK
201: QRGYEDAESI PSELSSSLDR VIDALLSTSQ PSDETPFRLG ASAYEALRAV VRVSNLEQAV VWSAIGDLMH CIMKRLDMTL DRQALTLGHK LKKNNLQIVL
301: CGVLQVIVQR LANSATVKIV TNAAHHLLFS FCRVLVCDSS TAQSEAMCWF AIAALANATG PEFGKHMPIL MQVKCCHTVI KLCKFCTKVL LSRLLELQFS
401: HASETLLLLL AMILRSACSM FWKSFKKLLT HRTGLMFKKR TRLNMWLRQG ICKAYSGILR GMKDPRIGFK VATHLFKFME GVWADRSRDK SVMHAAVAVL
501: TDFDLTIGSW TEEMTKELHN
001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV
Arabidopsis Description
KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.