CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14379	Canola	cytosol	99.54	99.54
AT5G53480.1	Thale cress	cytosol	95.16	94.94
PGSC0003DMT400047662	Potato	cytosol	86.98	86.68
PGSC0003DMT400050414	Potato	cytosol	86.29	86.29
Solyc06g052030.2.1	Tomato	plastid	76.96	85.31
Os12t0568800-01	Rice	plasma membrane	66.36	81.93
GSMUA_Achr1P28070_001	Banana	cytosol	79.15	81.79
GSMUA_Achr3P25220_001	Banana	cytosol	75.35	81.65
KRH53541	Soybean	cytosol	81.22	80.94
VIT_16s0098g01630.t01	Wine grape	plastid	88.48	80.84
TraesCS5D01G094600.1	Wheat	cytosol	80.18	79.82
EES16185	Sorghum	cytosol	80.07	79.7
TraesCS5A01G077200.1	Wheat	golgi	79.95	79.59
TraesCS5B01G088400.1	Wheat	cytosol	79.84	79.47
Solyc03g082940.2.1	Tomato	plastid	87.33	79.45
TraesCS5D01G095100.1	Wheat	golgi	79.49	79.13
TraesCS5A01G082600.1	Wheat	golgi	79.49	79.13
TraesCS5B01G088700.1	Wheat	cytosol	79.49	79.13
KRH64395	Soybean	peroxisome	70.74	79.02
HORVU5Hr1G021580.1	Barley	cytosol	79.26	78.9
HORVU5Hr1G021530.2	Barley	cytosol	79.26	78.27
GSMUA_Achr5P09570_001	Banana	cytosol	20.97	75.21
Zm00001d041556_P002	Maize	cytosol	79.03	69.5
GSMUA_Achr5P09580_001	Banana	cytosol	28.11	65.24
Zm00001d030694_P002	Maize	mitochondrion	79.03	63.87
CDY53085	Canola	cytosol	61.06	60.71
CDY44668	Canola	cytosol	60.94	60.6
CDX99262	Canola	cytosol	26.04	49.34
CDY28068	Canola	cytosol	18.32	32.85
CDY31391	Canola	cytosol	19.35	19.05
CDY47482	Canola	cytosol	19.01	18.69
CDX89768	Canola	cytosol	18.66	18.51
CDY02225	Canola	cytosol	18.66	18.37
CDY71774	Canola	cytosol	5.41	16.61
CDY26791	Canola	cytosol	2.42	16.41
CDY54431	Canola	cytosol	19.93	14.48
CDY26790	Canola	cytosol	1.96	14.41

Protein Annotations

Gene3D:1.25.10.10	MapMan:23.5.1.2.1	GO:A0A078HCX1	UniProt:A0A078HCX1	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY35657	ProteinID:CDY35657	ProteinID:CDY35657.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006810
GO:GO:0006886	GO:GO:0006913	GO:GO:0008150	GO:GO:0008536	GO:GO:0008565	EnsemblPlantsGene:GSBRNA2T00059050001
InterPro:IPR001494	InterPro:IPR011989	InterPro:Importin-beta_N	InterPro:KPNB1_plant	PFAM:PF03810	PFAM:PF13513
PFscan:PS50166	PANTHER:PTHR10527	PANTHER:PTHR10527:SF44	SMART:SM00913	SUPFAM:SSF48371	UniParc:UPI0004EDEBE1
SEG:seg	:	:	:	:	:

Description

BnaC09g29790DBnaC09g29790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCX1]

Coordinates

chrLK032357:+:288811..292744

Molecular Weight (calculated)

96034.2 Da

IEP (calculated)

4.447

GRAVY (calculated)

-0.038

Length

868 amino acids

Sequence
(BLAST)

001: MEVTQLLLNA QSIDGTVRKH AEENLKLFQS QNLAGFLLSL AGELANDEKP VDSRKLAGLV LKNALDAKEQ HRKYELVQRW LSLDMATKTQ IRAFLLKTLS
101: SPVPDVRSTA SQVIAKVAGI ELPQNQWPEL VGSLLSNIHQ LPAHVKQATL ETLGYLCEEV SPDVVEQEHV NKILTAVVQG MNAAEGNNDV RLAATRALYM
201: ALGFAQANFN NDMERDYIMR VVCEATLSPE VKIRQAAFEC LVSIASTYYE KLAHYMQDIF NITAKAVRED DESVALQAIE FWSSICDEEI DILEEYGGEF
301: TGDSDVPCFY FTKQALPALV PLLLETLLKQ EEDQDLDEGA WNIAMAGGTC LGLVARAVGD DIVPHVMPFI EEKISKPDWR EREAATYAFG SILEGPSPDK
401: LMTIVNAALT FMLNALTKDP SNHVKDTTAW TLGRIFEFLH GSTIETPIIT QANCQQIITV LIQTMKDAPN VAEKACGALY FLAQGYEDIG PNSPLTPFFQ
501: EIIQSLLAVA HREDATESRL RTAAYEALNE VVRCSTDETS AMVLQLVPVI MLELHNTLEG EKLSSDEREK QNELQGLLCG CLQVIIQKLG SEPTKYVFMQ
601: HADQMMGLFL RVFGCKSATA HEEAMLAIGA LAYAAGPDFA KYMPEFYKYL EMGLQNFEEY QVCAVTVGVI GDICRALEDK ILPYCDGIMT QLLKDLSSNQ
701: LHRSVKPPIF SCFGDIALAI GENFEKYINY SMPMLQSAAE LSAHASGADD EMTEYTNSLR NGILEAYSGI FQGFKNSPKT QLLIPYAPHI LQFLDSIYME
801: KDMDEVVMKT AIGVLGDLAD TLGSHVGGLI QQSVSSKEFL NECLSSDDHT IKEAAEWAKH AITRAISV

Best Arabidopsis Sequence Match ( AT5G53480.1 )
(BLAST)

001: MAMEVTQLLI NAQSIDGTVR KHAEESLKQF QEQNLAGFLL SLAGELANDE KPVDSRKLAG LVLKNALDAK EQHRKYELVQ RWLALDMSTK SQIRAFLLKT
101: LSAPVPDVRS TASQVIAKVA GIELPQKQWP ELIVSLLSNI HQLPAHVKQA TLETLGYLCE EVSPDVVEQE HVNKILTAVV QGMNAAEGNT DVRLAATRAL
201: YMALGFAQAN FNNDMERDYI MRVVCEATLS PEVKIRQAAF ECLVSIASTY YEKLAHYMQD IFNITAKAVR EDDESVALQA IEFWSSICDE EIDILEEYGG
301: EFAGDSDVPC FYFTKQALPG LVPLLLETLL KQEEDQDLDE GAWNIAMAGG TCLGLVARAV GDDIVPHVMP FIEEKISKPD WREREAATYA FGSILEGPSA
401: DKLMAIVNAA LTFMLNALTN DPSNHVKDTT AWTLGRIFEF LHGSTIETPI INQANCQQII TVLIQSMNDA PNVAEKACGA LYFLAQGYED IGPSSPLTPF
501: FQEIIKSLLA VAHREDATES RLRTAAYEAL NEVVRCSTDE TSTMVLQLVP VIMMELHNTL EGEKLSLDER EKQNELQGLL CGCLQVIIQK LGSEPTKSKF
601: MEYADQMMGL FLRVFGCRSA TAHEEAMLAI GALAYAAGPN FAKYMPEFYK YLEMGLQNFE EYQVCAVTVG VVGDVCRALE DKILPYCDGI MTQLLKDLSS
701: NQLHRSVKPP IFSCFGDIAL AIGEDFDKYW RYSMPMLQSA AELSAHSAGA DDEMTEYTNS LRNGILEAYS GIFQGFKNSA KTQLLIPFAP HILQFLDSIY
801: MEKDMDEVVM KTAIGVLGDL ADTLGSHVGG LIQQSVSSKE FLNECLSSED HTIKEAAEWA KHAITRAISV

Arabidopsis Description

KPNB1Importin subunit beta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.