Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000003.1-P | Field mustard | nucleus | 76.8 | 78.84 |
| CDY07787 | Canola | nucleus | 74.74 | 77.13 |
| CDX79736 | Canola | nucleus | 73.71 | 76.88 |
| CDX93375 | Canola | nucleus | 73.71 | 76.47 |
| Bra017183.1-P | Field mustard | nucleus | 72.68 | 74.6 |
| CDY18441 | Canola | nucleus | 72.16 | 74.47 |
| Bra005191.1-P | Field mustard | nucleus | 69.07 | 73.63 |
| CDX91366 | Canola | nucleus | 69.59 | 71.81 |
| CDX74957 | Canola | nucleus | 67.01 | 71.43 |
| AT3G53670.1 | Thale cress | nucleus | 60.31 | 57.64 |
Protein Annotations
| MapMan:35.2 | EntrezGene:818325 | UniProt:A0A178VSI5 | ProteinID:AAC98065.1 | ProteinID:AEC09406.1 | EMBL:AK176407 |
| EMBL:AK176430 | EMBL:AK176785 | EMBL:AK220984 | EMBL:AK226918 | EMBL:AK229913 | EMBL:AK230011 |
| EMBL:AK230020 | EMBL:AK230147 | EMBL:AK230323 | ArrayExpress:AT2G37480 | EnsemblPlantsGene:AT2G37480 | RefSeq:AT2G37480 |
| TAIR:AT2G37480 | RefSeq:AT2G37480-TAIR-G | EnsemblPlants:AT2G37480.1 | TAIR:AT2G37480.1 | Unigene:At.48559 | GO:GO:0003674 |
| GO:GO:0008150 | RefSeq:NP_850283.1 | ProteinID:OAP09420.1 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR34952 | PANTHER:PTHR34952:SF2 | UniProt:Q9ZUR8 | UniParc:UPI00000A327A |
| SEG:seg | : | : | : | : | : |
Description
Uncharacterized protein At2g37490 [Source:UniProtKB/TrEMBL;Acc:Q9ZUR8]
Coordinates
chr2:+:15737842..15739848
Molecular Weight (calculated)
21117.1 Da
IEP (calculated)
8.217
GRAVY (calculated)
-1.108
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVCGKLDF KDADFDISTS SPTQCSKGSE HTSFTGSEDS QESDGDETGY IDPTVNDETA VQDFGKSVLS PNSSDDEDKD ENLMTQTPIV LIPAIKGSRE
101: KYGLSLRKSS VSWGADVYDP PPSIASHTVT RSKKQQQKSK SKDNHRKTGK KGQKSKDNSS SRGGSSKDKK QASRKHSRDK FDWVTQMPIV AASS
101: KYGLSLRKSS VSWGADVYDP PPSIASHTVT RSKKQQQKSK SKDNHRKTGK KGQKSKDNSS SRGGSSKDKK QASRKHSRDK FDWVTQMPIV AASS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.