Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18354 | Canola | nucleus | 63.18 | 70.83 |
| Bra017091.1-P | Field mustard | nucleus | 66.89 | 69.47 |
| CDX93287 | Canola | cytosol, plastid | 70.27 | 66.88 |
| PGSC0003DMT400079098 | Potato | mitochondrion | 44.59 | 48.53 |
| Solyc06g054580.2.1 | Tomato | nucleus | 42.91 | 46.69 |
| VIT_05s0020g01720.t01 | Wine grape | plastid | 46.62 | 40.59 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | EntrezGene:818496 | ProteinID:AEC09635.1 | ArrayExpress:AT2G39100 | EnsemblPlantsGene:AT2G39100 |
| RefSeq:AT2G39100 | TAIR:AT2G39100 | RefSeq:AT2G39100-TAIR-G | EnsemblPlants:AT2G39100.1 | TAIR:AT2G39100.1 | EMBL:AY065197 |
| EMBL:AY081521 | Unigene:At.20141 | InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_850310.1 | PFAM:PF13639 |
| PO:PO:0000293 | PO:PO:0007115 | PO:PO:0009025 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR22937 |
| PANTHER:PTHR22937:SF95 | UniProt:Q8VZ73 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000009D928 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : | : |
Description
Putative RING zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q8VZ73]
Coordinates
chr2:+:16317356..16319387
Molecular Weight (calculated)
34426.3 Da
IEP (calculated)
10.325
GRAVY (calculated)
-0.510
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPLPSSTAP SSSRHLRSPE SIAKFAGRAI FPALQGKSCP ICLENLTERR SAAVITVCKH GYCLACIRKW SSFKRNCPLC NTRFDSWFIV SDFASRKYHK
101: EQLPILRDRE TLTYHRNNPS DRRRIIQRSR DVLENSSSRS RPLPWRRSFG RPGSVPDSVI FQRKLQWRAS IYTKQLRAVR LHSRRLELSL AVNDYTKAKI
201: TERIEPWIRR ELQAVLGDPD PSVIVHFASA LFIKRLEREN NRQTGQTGML VEDEVSSLRK FLSDKVDIFW HELRCFAESI LTMETYDAVV EYNEVE
101: EQLPILRDRE TLTYHRNNPS DRRRIIQRSR DVLENSSSRS RPLPWRRSFG RPGSVPDSVI FQRKLQWRAS IYTKQLRAVR LHSRRLELSL AVNDYTKAKI
201: TERIEPWIRR ELQAVLGDPD PSVIVHFASA LFIKRLEREN NRQTGQTGML VEDEVSSLRK FLSDKVDIFW HELRCFAESI LTMETYDAVV EYNEVE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.