Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033136.1-P | Field mustard | cytosol | 22.38 | 29.09 |
| Bra033091.1-P | Field mustard | cytosol | 30.77 | 28.39 |
| CDY44403 | Canola | cytosol | 30.07 | 28.29 |
| CDY37633 | Canola | cytosol | 21.68 | 27.68 |
| CDY04062 | Canola | cytosol | 28.67 | 27.15 |
| AT3G15740.1 | Thale cress | cytosol | 32.87 | 20.98 |
| AT3G14970.1 | Thale cress | cytosol | 26.57 | 17.27 |
Protein Annotations
| ArrayExpress:AT3G15440 | EnsemblPlants:AT3G15440.1 | EnsemblPlantsGene:AT3G15440 | EntrezGene:820783 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | ProteinID:AAF35410.1 | ProteinID:AEE75675.1 | ProteinID:BAB02373.1 | ProteinID:OAP05803.1 |
| RefSeq:AT3G15440 | RefSeq:AT3G15440-TAIR-G | RefSeq:NP_188163.1 | SEG:seg | TAIR:AT3G15440 | TAIR:AT3G15440.1 |
| UniParc:UPI00000A8369 | UniProt:A0A178VL93 | UniProt:Q9LE10 | MapMan:35.2 | : | : |
Description
MJK13.10 protein [Source:UniProtKB/TrEMBL;Acc:Q9LE10]
Coordinates
chr3:-:5211795..5212506
Molecular Weight (calculated)
16507.4 Da
IEP (calculated)
4.029
GRAVY (calculated)
-0.483
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MECIVDDVSD STCMVTPIYY SKETTQDRQT FLFDFEVVYT KVPEPNSDGE SDYMSSKVKT RTTNQLQRYG RDEFIGQDEE QIKATIYEIL NDVGVPPYLG
101: IMKTFAEEIQ SILNSPLEKL EKIKVKIEVV AHMFPEDDEI DVE
101: IMKTFAEEIQ SILNSPLEKL EKIKVKIEVV AHMFPEDDEI DVE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.