Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P21840_001 | Banana | cytosol | 60.27 | 97.78 |
| EES07961 | Sorghum | cytosol | 97.26 | 97.26 |
| Zm00001d004936_P002 | Maize | cytosol | 97.26 | 97.26 |
| EES16514 | Sorghum | cytosol | 97.26 | 97.26 |
| AT5G42300.1 | Thale cress | cytosol | 94.52 | 94.52 |
| TraesCS5D01G141100.1 | Wheat | cytosol | 94.52 | 94.52 |
| TraesCS5B01G132000.1 | Wheat | cytosol | 94.52 | 94.52 |
| TraesCS5A01G132900.1 | Wheat | cytosol | 94.52 | 94.52 |
| HORVU4Hr1G025840.1 | Barley | cytosol | 93.15 | 93.15 |
| TraesCS4D01G128400.1 | Wheat | cytosol | 93.15 | 93.15 |
| TraesCS4B01G133400.1 | Wheat | cytosol | 93.15 | 93.15 |
| TraesCS4A01G185200.1 | Wheat | cytosol | 93.15 | 93.15 |
| KRH21110 | Soybean | cytosol | 91.78 | 91.78 |
| KRH11137 | Soybean | cytosol | 91.78 | 91.78 |
| VIT_19s0090g00430.t01 | Wine grape | cytosol | 91.78 | 91.78 |
| OQU85350 | Sorghum | cytosol | 90.41 | 90.41 |
| Os11t0145400-01 | Rice | cytosol | 97.26 | 85.54 |
| Os12t0143100-01 | Rice | cytosol | 95.89 | 76.92 |
| Os02t0628800-01 | Rice | cytosol | 93.15 | 62.39 |
| HORVU5Hr1G042600.1 | Barley | mitochondrion | 94.52 | 46.94 |
Protein Annotations
| MapMan:19.2.2.4.1 | Gene3D:3.10.20.90 | EntrezGene:823654 | ProteinID:AEE78001.1 | ProteinID:ANM65042.1 | ArrayExpress:AT3G45180 |
| EnsemblPlantsGene:AT3G45180 | RefSeq:AT3G45180 | TAIR:AT3G45180 | RefSeq:AT3G45180-TAIR-G | EnsemblPlants:AT3G45180.1 | TAIR:AT3G45180.1 |
| ProteinID:CAB72156.1 | GO:GO:0000398 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031386 | InterPro:IPR000626 |
| RefSeq:NP_001319687.1 | RefSeq:NP_190104.1 | PFAM:PF00240 | PFscan:PS50053 | PANTHER:PTHR13042 | PANTHER:PTHR13042:SF4 |
| UniProt:Q9M1U1 | SUPFAM:SSF54236 | UniParc:UPI00000A81D7 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | : |
Description
Ubiquitin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9M1U1]
Coordinates
chr3:-:16538237..16539212
Molecular Weight (calculated)
8621.5 Da
IEP (calculated)
8.441
GRAVY (calculated)
-0.660
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MIEVVLNDRL GKKVRVKCNE EDTIGDLKKL VAAQTGTRPE KIRIQKWYNI YKDHIPLKDY EIHDGMGLEL YYN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.