Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0565000-01 | |
| Os04t0445600-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G42300.1 | Os02t0565000-01 | AT1G54060.1 | 21798944 |
| AT5G42300.1 | Os04t0445600-00 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P21840_001 | Banana | cytosol | 40.37 | 97.78 |
| Bra023834.1-P | Field mustard | cytosol | 65.14 | 97.26 |
| CDY34256 | Canola | cytosol | 65.14 | 97.26 |
| CDY46327 | Canola | cytosol | 65.14 | 97.26 |
| AT5G42300.1 | Thale cress | cytosol | 64.22 | 95.89 |
| HORVU4Hr1G025840.1 | Barley | cytosol | 64.22 | 95.89 |
| TraesCS4D01G128400.1 | Wheat | cytosol | 64.22 | 95.89 |
| TraesCS4B01G133400.1 | Wheat | cytosol | 64.22 | 95.89 |
| TraesCS4A01G185200.1 | Wheat | cytosol | 64.22 | 95.89 |
| OQU85350 | Sorghum | cytosol | 63.3 | 94.52 |
| TraesCS5D01G141100.1 | Wheat | cytosol | 63.3 | 94.52 |
| TraesCS5B01G132000.1 | Wheat | cytosol | 63.3 | 94.52 |
| TraesCS5A01G132900.1 | Wheat | cytosol | 63.3 | 94.52 |
| AT3G45180.1 | Thale cress | cytosol | 62.39 | 93.15 |
| KRH21110 | Soybean | cytosol | 62.39 | 93.15 |
| KRH11137 | Soybean | cytosol | 62.39 | 93.15 |
| VIT_19s0090g00430.t01 | Wine grape | cytosol | 61.47 | 91.78 |
| Os11t0145400-01 | Rice | cytosol | 64.22 | 84.34 |
| Os12t0143100-01 | Rice | cytosol | 65.14 | 78.02 |
| HORVU5Hr1G042600.1 | Barley | mitochondrion | 65.14 | 48.3 |
Protein Annotations
| MapMan:19.2.2.4.1 | Gene3D:3.10.20.90 | UniProt:A0A0N7KFQ6 | ProteinID:BAS79881.1 | GO:GO:0000398 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0031386 | InterPro:IPR000626 | EnsemblPlantsGene:Os02g0628800 | EnsemblPlants:Os02t0628800-01 | PFAM:PF00240 |
| PFscan:PS50053 | PANTHER:PTHR13042 | PANTHER:PTHR13042:SF2 | SUPFAM:SSF54236 | UniParc:UPI000393A843 | InterPro:Ubiquitin-like_domsf |
| InterPro:Ubiquitin_dom | SEG:seg | : | : | : | : |
Description
Similar to Ubiquitin-like protein 5 (Fragment). (Os02t0628800-01)
Coordinates
chr2:-:25146685..25147276
Molecular Weight (calculated)
12830.7 Da
IEP (calculated)
9.977
GRAVY (calculated)
-0.644
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: NARLVVFIIV APRFPCCFRR SEEEKRKRKK KKKGAEMIEV VLNDRLGKKV RVKCNEDDTI GDLKKLVAAQ TGTRAEKIRI QKWYNIYKDH ITLADYEIHD
101: GMGLELYYD
101: GMGLELYYD
1: MIEVVLNDRL GKKVRVKCND DDTIGDLKKL VAAQTGTRAE KIRIQKWYNI YKDHITLKDY EIHDGMGLEL YYN
Arabidopsis Description
UBL5Ubiquitin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.