Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- nucleus 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G077940.1 | |
| HORVU6Hr1G050140.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G42300.1 | HORVU2Hr1G077940.1 | AT1G54060.1 | 21798944 |
| AT5G42300.1 | HORVU6Hr1G050140.1 | AT1G54060.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P21840_001 | Banana | cytosol | 30.61 | 100.0 |
| TraesCS5A01G132900.1 | Wheat | cytosol | 49.66 | 100.0 |
| TraesCS5B01G132000.1 | Wheat | cytosol | 49.66 | 100.0 |
| TraesCS5D01G141100.1 | Wheat | cytosol | 49.66 | 100.0 |
| HORVU4Hr1G025840.1 | Barley | cytosol | 48.98 | 98.63 |
| Bra023834.1-P | Field mustard | cytosol | 47.62 | 95.89 |
| CDY34256 | Canola | cytosol | 47.62 | 95.89 |
| CDY46327 | Canola | cytosol | 47.62 | 95.89 |
| AT3G45180.1 | Thale cress | cytosol | 46.94 | 94.52 |
| AT5G42300.1 | Thale cress | cytosol | 46.94 | 94.52 |
| KRH11137 | Soybean | cytosol | 46.94 | 94.52 |
| KRH21110 | Soybean | cytosol | 46.94 | 94.52 |
| OQU85350 | Sorghum | cytosol | 46.94 | 94.52 |
| VIT_19s0090g00430.t01 | Wine grape | cytosol | 46.94 | 94.52 |
| Os02t0628800-01 | Rice | cytosol | 48.3 | 65.14 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G042600.1 | EnsemblPlantsGene:HORVU5Hr1G042600 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR13042 | PANTHER:PTHR13042:SF4 | PFAM:PF00240 |
| PFscan:PS50053 | SEG:seg | SUPFAM:SSF54236 | UniParc:UPI0002960AE9 | UniProt:M0X3A3 | MapMan:19.2.2.4.1 |
Description
No Description!
Coordinates
chrchr5H:-:326710039..326713526
Molecular Weight (calculated)
16737.2 Da
IEP (calculated)
10.494
GRAVY (calculated)
-0.628
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKSYLWRSG KKIIFPNFTV TRVHLNSNVK AHGPHRTQVP SSLREKSTPS SHRVISRGGA GSRGARVWEG AAEKMIEVVL NDRLGKKVRV KCNEDDTIGD
101: LKKLVAAQTG TRPEKIRIQK WYTIYKDHIT LGDYEIHDGM GLELYYN
101: LKKLVAAQTG TRPEKIRIQK WYTIYKDHIT LGDYEIHDGM GLELYYN
1: MIEVVLNDRL GKKVRVKCND DDTIGDLKKL VAAQTGTRAE KIRIQKWYNI YKDHITLKDY EIHDGMGLEL YYN
Arabidopsis Description
UBL5Ubiquitin-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGZ9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.