Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 3
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67667 | Canola | plastid | 93.58 | 93.58 |
| Bra006659.1-P | Field mustard | plastid | 91.74 | 91.74 |
| CDX88759 | Canola | plastid | 91.74 | 91.74 |
| KRH26396 | Soybean | endoplasmic reticulum | 72.48 | 75.24 |
| VIT_13s0019g04080.t01 | Wine grape | plastid | 68.81 | 69.44 |
| Solyc03g116990.1.1 | Tomato | plastid | 66.97 | 66.97 |
| PGSC0003DMT400090964 | Potato | plastid | 65.14 | 66.36 |
| KRH38145 | Soybean | golgi, plastid, vacuole | 42.2 | 65.71 |
| PGSC0003DMT400051074 | Potato | mitochondrion, plastid | 46.79 | 65.38 |
| Solyc06g010060.1.1 | Tomato | nucleus | 66.97 | 65.18 |
| AT3G60540.2 | Thale cress | plastid | 47.71 | 64.2 |
| KRH01163 | Soybean | plastid | 48.62 | 63.86 |
| KRH01231 | Soybean | mitochondrion | 48.62 | 63.86 |
| AT2G45070.3 | Thale cress | plastid | 44.95 | 59.76 |
Protein Annotations
| MapMan:23.3.1.3.2 | EntrezGene:28721282 | ProteinID:AED97333.1 | EMBL:AK118120 | ProteinID:ANM68802.1 | ArrayExpress:AT5G60460 |
| EnsemblPlantsGene:AT5G60460 | RefSeq:AT5G60460 | TAIR:AT5G60460 | RefSeq:AT5G60460-TAIR-G | EnsemblPlants:AT5G60460.1 | TAIR:AT5G60460.1 |
| ProteinID:BAB08229.1 | EMBL:BT005455 | GO:GO:0003674 | GO:GO:0005086 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005784 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006616 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0015450 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0031204 |
| GO:GO:0031205 | GO:GO:0065009 | RefSeq:NP_001318850.1 | RefSeq:NP_001330524.1 | PFAM:PF03911 | PIRSF:PIRSF006398 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR13509 | PANTHER:PTHR13509:SF8 | UniProt:Q9FKK1 | InterPro:Sec61-beta/Sbh | InterPro:SecG/Sec61-beta/Sbh | TMHMM:TMhelix |
| UniParc:UPI000000C667 | SEG:seg | : | : | : | : |
Description
Protein transport protein Sec61 subunit beta [Source:UniProtKB/TrEMBL;Acc:Q9FKK1]
Coordinates
chr5:-:24316833..24318241
Molecular Weight (calculated)
10866.0 Da
IEP (calculated)
12.072
GRAVY (calculated)
-0.008
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGSSQSQQ STSTGSSTAR PGLAAPRGSA AATAGMRRRR LGGGGGVSSG GGSGVGSGSS NMLRFYTDDA PGLKISPTVV LIMSLCFIGF VTALHVFGKL
101: YLHKSGSQA
101: YLHKSGSQA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.